| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2068 |
|---|
| Symbol | |
|---|
| ID | 5869857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2321428 |
|---|
| End bp | 2322024 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641547193 |
|---|
| Product | NAD(P)H dehydrogenase (quinone) |
|---|
| Protein accession | YP_001668305 |
|---|
| Protein GI | 167033074 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCCT TGATCGTCGT CGGTCATCAC GACCCGCAAT CCCTCACTCA CGCCCTTGCC
CGCCAAGTCG CCGAAGGCCT TGCCAGTGCT GGGCACACTG GCGAAATCGC CGACCTGGCC
AGTGAAGGTT TCGACCCACG CTTTGGCCTG GCCGATCACG CGGTGCACCG CCGCCAGGCA
GCGCCACCGG CTGACGTACT GAAGGAGCAG GCGCGCATCG ACCGCGCCGA TGCCCTGGTA
CTGGTTTTCC CCATCTATTG GTGGTCGTTG CCGGCTTTGC TCAAAGGGTG GGTCGAGCGG
GTATTCAGCA ATGGTTGGGC GTTCGACTAC GAAGGGGGCG TTAGCGTCAA GAAGCTGCGC
GGCATGAAGG TGCACCTGGT CGGTGTTGCC GGCGCCGACA GCGGTACCTT CGATCGGCAT
GGCTATGCCG AGGCCATGCG CGTGCAGATC GAGCACGGCA TCTTCGACTA CTGCGGCGCC
GAAGTACTGG GTTCGACCTT GTTGGACGAC AGCGAAGGCC CCAGCCAGGT TCGCCATTTG
CAGCACGCCA ACGCCTTGGG CAAAAAGCTG TTTGCCGAAT CTCAGGCCGC TGCCTGA
|
|---|
| Protein sequence | MHALIVVGHH DPQSLTHALA RQVAEGLASA GHTGEIADLA SEGFDPRFGL ADHAVHRRQA
APPADVLKEQ ARIDRADALV LVFPIYWWSL PALLKGWVER VFSNGWAFDY EGGVSVKKLR
GMKVHLVGVA GADSGTFDRH GYAEAMRVQI EHGIFDYCGA EVLGSTLLDD SEGPSQVRHL
QHANALGKKL FAESQAAA
|
|---|
| |