Gene PputGB1_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2056 
Symbol 
ID5869845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2307636 
End bp2308424 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID641547181 
ProductABC transporter related 
Protein accessionYP_001668293 
Protein GI167033062 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCC TGGCTGCTGT ACAAGTGCAC CCACTGAGTT GCCAGGGGCT GGGGCTGCAA 
CTGGCCGGCA ATGCCGTACT CAGCGGTATC GACCTTGGCG TTGTCGCTGG TGAAACCCTG
GGTATCGTCG GCCCCAACGG CTCGGGCAAA TCCTCGCTAC TGAAGTTGCT GGCAGGGCTG
CGCAAACCCA CCTGCGGCAA CGTACAGCTG ATGGGCGAAC CGCTGGCGCA GATGCCTCGC
CGCCATGTAG CCCAGGCCTT GGCACTGGTC GAACAACAGG CCGACACCCT CGATGCGATC
AGCGTGTTCG ACGCGGTTGC CTTGGGCCGC ACGCCCTGGC TCTCGGCCCT GGCGCCGTTC
TCCCGGCAGG ACCGCGACAT CGTCGAGCAA GCGTTGGCCG ACCTTGATGC CTTGCACCTG
CGTACGCGCC TGTGGGGCTC GCTGTCCGGT GGCGAGCGCC AGCGTGTGCA CATCGCCCGC
GCCTTGGCCC AACGCCCGCA GGTACTGCTG CTGGACGAAC CGACCAACCA CCTGGACATC
CAGCATCAGC TAAGCCTGCT GCAGCAAGTG CAGGCCCTGC CGGTAACCAC CCTGGTGGCT
TTGCACGACC TCAACCAGGC GCTCACCTGT GACCGTGTGG CGGTACTCGA CAAGGGCCGC
CTGGTCGCCC TTGGCAAACC ACTCGACGTA CTCACCCCCG AGCGCCTGCT GAGTACCTTC
GGCGTCCACG CCCACTACCT TACCGACCCT TACGACGGCG CGCGCATTCT GCGCTTTCGC
GCCCCCTGA
 
Protein sequence
MTLLAAVQVH PLSCQGLGLQ LAGNAVLSGI DLGVVAGETL GIVGPNGSGK SSLLKLLAGL 
RKPTCGNVQL MGEPLAQMPR RHVAQALALV EQQADTLDAI SVFDAVALGR TPWLSALAPF
SRQDRDIVEQ ALADLDALHL RTRLWGSLSG GERQRVHIAR ALAQRPQVLL LDEPTNHLDI
QHQLSLLQQV QALPVTTLVA LHDLNQALTC DRVAVLDKGR LVALGKPLDV LTPERLLSTF
GVHAHYLTDP YDGARILRFR AP