Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2056 |
Symbol | |
ID | 5869845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2307636 |
End bp | 2308424 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641547181 |
Product | ABC transporter related |
Protein accession | YP_001668293 |
Protein GI | 167033062 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCC TGGCTGCTGT ACAAGTGCAC CCACTGAGTT GCCAGGGGCT GGGGCTGCAA CTGGCCGGCA ATGCCGTACT CAGCGGTATC GACCTTGGCG TTGTCGCTGG TGAAACCCTG GGTATCGTCG GCCCCAACGG CTCGGGCAAA TCCTCGCTAC TGAAGTTGCT GGCAGGGCTG CGCAAACCCA CCTGCGGCAA CGTACAGCTG ATGGGCGAAC CGCTGGCGCA GATGCCTCGC CGCCATGTAG CCCAGGCCTT GGCACTGGTC GAACAACAGG CCGACACCCT CGATGCGATC AGCGTGTTCG ACGCGGTTGC CTTGGGCCGC ACGCCCTGGC TCTCGGCCCT GGCGCCGTTC TCCCGGCAGG ACCGCGACAT CGTCGAGCAA GCGTTGGCCG ACCTTGATGC CTTGCACCTG CGTACGCGCC TGTGGGGCTC GCTGTCCGGT GGCGAGCGCC AGCGTGTGCA CATCGCCCGC GCCTTGGCCC AACGCCCGCA GGTACTGCTG CTGGACGAAC CGACCAACCA CCTGGACATC CAGCATCAGC TAAGCCTGCT GCAGCAAGTG CAGGCCCTGC CGGTAACCAC CCTGGTGGCT TTGCACGACC TCAACCAGGC GCTCACCTGT GACCGTGTGG CGGTACTCGA CAAGGGCCGC CTGGTCGCCC TTGGCAAACC ACTCGACGTA CTCACCCCCG AGCGCCTGCT GAGTACCTTC GGCGTCCACG CCCACTACCT TACCGACCCT TACGACGGCG CGCGCATTCT GCGCTTTCGC GCCCCCTGA
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Protein sequence | MTLLAAVQVH PLSCQGLGLQ LAGNAVLSGI DLGVVAGETL GIVGPNGSGK SSLLKLLAGL RKPTCGNVQL MGEPLAQMPR RHVAQALALV EQQADTLDAI SVFDAVALGR TPWLSALAPF SRQDRDIVEQ ALADLDALHL RTRLWGSLSG GERQRVHIAR ALAQRPQVLL LDEPTNHLDI QHQLSLLQQV QALPVTTLVA LHDLNQALTC DRVAVLDKGR LVALGKPLDV LTPERLLSTF GVHAHYLTDP YDGARILRFR AP
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