| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2050 |
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| Symbol | |
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| ID | 5869839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2302619 |
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| End bp | 2304190 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547175 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001668287 |
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| Protein GI | 167033056 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.645943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCACACG CCAAGCATGG ATTGCGCCTG GATTTACGTA CACTCATTCT GGTGCTCTGC
GCCCTTACCG CAGTGGTCAT GCTGTGCGCC AGCTACTTCG CCAGCTACCG AGTGCAGCGC
CAACTGCTGA TCGACAACGC GCTGGAAGCC AACCGGGTGT ATGCGACGAA GCTGGCCAGC
ATCACCGAAA CCTTCATCGG CAACGCCCTG CAGCAACTGG CGTTCAGCGC CAGCCTGCAG
GGCCGTCAGC TGAGCGATGG TGCTGCGCTG CAGGTGGAAA CCGAGCGTGT GCTGGGCCAG
AGCATGGCCT TCAACTCCAC CTTCGTGATC GACGCCAACG GCGTGCTGTT GGCAGTATCC
CCAGCCCCGC TGCGCCACCT GGTCGGCACC CACGTGCAGT CGCCCGGTGC CCAGGAAGCC
TTGCACGAAC GCCGTCCACT GGTTTCCACG CCCTACCTGT CGGCGGCCGA CAACCTGGTG
GTGGCGCTCT CGCAACCCAT TTTCGACAGC AACGGCCGCT ACCTGGGCTA TGTGGGCGGC
AGCCTGTACC TGCGTGAGCG CAATATCCTC AACAGCCTGC TGGGCGAGCA CTTCTACAAG
GACGGTTCTT ACCTGTACGT AGTCGATCGC AACCGCCGCC TGCTGTACCA CCCCAACAGC
GAACGGGTAG GCACCGTGGT GGAGGGCAAC GCGCTGGTAG ACCAGTTGGC GACACTGGAC
AGCGGTACTC GGCAACTGAC CAACAGCCTG GGCGTGGAAA TGCTCGCCGG CTTCGCCACC
GTACCCAGCG CCGGCTGGGG CGTGGTCGCG CAGCAGCCCT TGGCGCAGAC GGTGACGCCA
CTGAGCCACC TGGTGCTGAA CGTCGTCGGC ACTTCGGCAC CCTTGGCGCT GGTTGGCAGC
CTGCTGCTGT GGTGGTTGGC CATGACCATC GCCCGGCCGC TGTGGCAACT GGCCGCGGGT
GCCCGCTCGA TGGACCGCGC CGGCACCGCC GAACATTTGC ATCAGGTGCG GGCCTGGTAC
TTCGAGGCAG CAGAACTCAA GCGCGCGTTG CTGTTCGGCT TGAACTTGCT GCAAGAGCGG
ATTGGCCGGC TCAATCGTGA CGCCCAGACC GACCCGCTGA CGGGCCTGGG CAACCGCCGC
AGCCTGGAGT TCAGCCTGTC GCTGCTGGAA GCCGAAGGAA GAGCATTTGC GGCCATCGAG
CTGGATATCG ATCACTTCAA GCGGGTCAAC GACAACCATG GGCATGAGGT GGGTGATCAG
GTGCTGCGCC GGCTGGCGGA ATTGATGCGC CGTTGTTGCC GCGAAGGTGA CCTGCTTTGC
CGCACCGGGG GCGAAGAATT CCTGATGCTG CTGCCAGGGG CCAGCCTGGA AGTGGCGGCG
GCGGTGGCCG AACGGCTGCG GGTGACAGTG CAGGACACGC CTGTGGAGCC CGTGGGGGCA
GTGACGATTT CGCTGGGGGT GGCGCGCTGG GATGGTGATG CGGGCAGCAA GCCTATGGAA
GCTTTGGGCC TGGCGGACCG GGCGCTGTAC CAGGCCAAGC AGCAAGGTCG CAACCGGGTG
GCCATCGCCT GA
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| Protein sequence | MPHAKHGLRL DLRTLILVLC ALTAVVMLCA SYFASYRVQR QLLIDNALEA NRVYATKLAS
ITETFIGNAL QQLAFSASLQ GRQLSDGAAL QVETERVLGQ SMAFNSTFVI DANGVLLAVS
PAPLRHLVGT HVQSPGAQEA LHERRPLVST PYLSAADNLV VALSQPIFDS NGRYLGYVGG
SLYLRERNIL NSLLGEHFYK DGSYLYVVDR NRRLLYHPNS ERVGTVVEGN ALVDQLATLD
SGTRQLTNSL GVEMLAGFAT VPSAGWGVVA QQPLAQTVTP LSHLVLNVVG TSAPLALVGS
LLLWWLAMTI ARPLWQLAAG ARSMDRAGTA EHLHQVRAWY FEAAELKRAL LFGLNLLQER
IGRLNRDAQT DPLTGLGNRR SLEFSLSLLE AEGRAFAAIE LDIDHFKRVN DNHGHEVGDQ
VLRRLAELMR RCCREGDLLC RTGGEEFLML LPGASLEVAA AVAERLRVTV QDTPVEPVGA
VTISLGVARW DGDAGSKPME ALGLADRALY QAKQQGRNRV AIA
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