| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2045 |
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| Symbol | |
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| ID | 5869834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2296594 |
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| End bp | 2297931 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547170 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001668282 |
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| Protein GI | 167033051 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.817358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAC CTCACGAGGT ATCCCCCGCC ACCCTGCGCA GGGTGATCGC CGCCTCGGCC
ATCGGCAATT TCGTCGAATG GTTCGACTTC GCCGTGTATG GCTTTCTTGC CACGCTGATC
GCCAGCCAGT TCTTTGCCAG CGAAGACCCC AGCGTGGCGT TGCTCAAAAC GTTCGCGGTG
TTTGCCGTGG CCTTTGCCCT TCGCCCGCTG GGCGGGATCG TGTTCGGCGC GCTGGGCGAC
CGCCTGGGGC GCAAGCGCAT CCTGTCGCTG ACAATCCTCT TGATGGCCGG CTCCACCACC
CTGATCGGCC TGCTGCCGAC CTACGCCAGC ATTGGCCTGG CAGCCCCCGT GCTGCTCACC
CTGGCGCGCT GCCTGCAGGG CTTTTCTGCC GGTGGCGAGT ACGCGGGGGC CTGTGCCTAC
TTGATGGAGC ACGCACCTAA CGACAGGCGT GCGTTTTACG GCAGTTTCGT GCCGGTTTCG
ACCTTTTCCG CCTTCGCCTG CGCCGCAGTG ATCGCCTATG GGCTGGAAGC CAGCCTGTCG
GCCGAGGCAA TGAATGCCTG GGGCTGGCGC GTTCCATTCC TGATTGCCGC GCCGCTGGGG
CTGGTCGGTC TGTACCTGCG CTGGCGCATG GAAGAAACCC CGGCATTCCG CGAAGCCGTC
GCCCAAGGCA AGGAACATGA GCATTCGCCG CTCAAATACA CCCTGCGTCA CCATGGCCGG
GTCATTCGCA ACCTGGGGGC GTTCATCTCG CTGACCGCCC TGTCGTTCTA CATGTTCACC
ACCTACTTCG CCACGTACCT GCAACTGGTA GGCAACCTGA CCCGCGCACA GTCGCTACTG
GTGACCACCG TGGCCCTGCT GTTCGCCGCC GTCGGCTGCC CGCTGGCCGG CGCGTTCTCG
GACCGAGTGG GGCGGCGCAA GACCATCGGC TTTACTTGCC TGTGGGTGAT GCTGTGCGTG
TTCCCGGCAT ACTGGCTGGC CAGCTCTGGC TCGATGTCGG GTGCACTGCT GGGGGTGATT
CTGTTGGCGG TGGGCGCGTT GTGCAGTGGC GTGGTCACTG CGGCGTTGCT GTCCGAAAGC
TTCCCAACCC GCACCCGCTA CACCGCTTCG GCGATTACCT ACAACGTGGC CTATACGCTG
TTTGGCGGCA CCGCGCCGCT GGTGGCGACC TGGCTGATCG GGCAGACCGG CAGCAGCCTG
GCACCGGCGT TTTACCTGGT GGTGATTGCG CTGGTGGCGC TGGTGGGCGG GTTGGCGTTG
CCGGAGACTT CGCGGATTTC GTTGCATGAT GAGGGGGGGG TAGACGGCGT GCAGTCTGGA
GTTCGTAGTA CTGTCTGA
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| Protein sequence | MSAPHEVSPA TLRRVIAASA IGNFVEWFDF AVYGFLATLI ASQFFASEDP SVALLKTFAV
FAVAFALRPL GGIVFGALGD RLGRKRILSL TILLMAGSTT LIGLLPTYAS IGLAAPVLLT
LARCLQGFSA GGEYAGACAY LMEHAPNDRR AFYGSFVPVS TFSAFACAAV IAYGLEASLS
AEAMNAWGWR VPFLIAAPLG LVGLYLRWRM EETPAFREAV AQGKEHEHSP LKYTLRHHGR
VIRNLGAFIS LTALSFYMFT TYFATYLQLV GNLTRAQSLL VTTVALLFAA VGCPLAGAFS
DRVGRRKTIG FTCLWVMLCV FPAYWLASSG SMSGALLGVI LLAVGALCSG VVTAALLSES
FPTRTRYTAS AITYNVAYTL FGGTAPLVAT WLIGQTGSSL APAFYLVVIA LVALVGGLAL
PETSRISLHD EGGVDGVQSG VRSTV
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