| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2036 |
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| Symbol | |
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| ID | 5869825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2283977 |
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| End bp | 2285713 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641547161 |
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| Product | S-type pyocin domain-containing protein |
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| Protein accession | YP_001668273 |
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| Protein GI | 167033042 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.206193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCC GCACGACCAT GACAGCTTCA GAAATTGGTG AAATTTATTC ACCAGCTCCA
TTCCGGTATG ACTTTGAATA CCTCTTGAAT TGGGCTGAGC CTTTTACCCT TCCACTCGTA
CCACCAGATA GTGCGGCATT TTTCAGTATC GGTGCTGACA GCAGGGATGC CGAAGCTAAA
GCACAAAAGA TTATAAACAA AATCGAAGCA ACTCGCCCCT CCGCCCCACC TGGCCTGAAG
CAATATCTGG ACAACCACTA CTCAGCAATT GACGCTCGTC ACACTGACGA ACTAATCAGA
CTGCAGGCCA AGCGGCAATT TCTTCTAGAT CTTCAAGAAA AAATCATCTA CAAGCGCCTA
CCCACTGACG ACTTCTCAGG AATACATGTG TATGCCCCCG GGCTTACACC AGCCTACCTC
TTTTATACCT ATATAGACCC TCACATCAAC GTTGGAAAAG AGTTCTACAT CGCACAGGGC
TTCCTGTTTG CCCTTATGCG AAGCATCACT GCAGCGCAGA TTGAAATCCT GCTAGGCCAG
AGTCTGAAAA TAATCCATCG CAAAATAACT ACTGTCAACT CAAAACTTGC ACCTACTGAA
AAAATCACCT CGGAAAGCAA TACCATAACC TTTAGCATAA CACCTTCAAT TCAACTCTCA
ACAACCTTGG GCGCAATAGG CAATAGCCAC TACCATAATC GCCAATTAGA AACAACTTTG
CGATCAGGCC GACAATTGCT GGCAAGGGCA GCCGGCGCTG CTGCATCCCG GCTATTCAAC
GTTGGCATCG GTGCTCTGCT CTATTCTTCC GAACTCGGCA ACAGTGATCT CTATCATGAA
ACAACACTGA GCCTCCCAGC CGATTCATTA ATACCGGACC TACCCGATCA GCTGTACGAG
AAAGCCCTCA GCCATGGTGT AGCGGAGTCA ACCTATCGGA TTTATACGAG GAATGACATC
TATACACTCA TCAAAAACCA GCAGACAGCA AGTCTCGAAA GCAGAGTACC TCTACGCCCC
CTCTACTTCG ACGAGGCGAC GAACAGCTAC ATTTCCGTAC CTTCGCAAAA GTTTCCAATC
AAGCTAACGT TACCCGCCCA CACACCCGGC GACACTTCGA CAACTAAACC TGGCGCGCAG
ATACCTTCCT ACCCCTATCG TGGCGTGACA CTCAATCCAC TGCACATCGA AGCCTCCCCT
CTACCCGCGC TGGAACCGGA GGACTTCAAA GACTGCATTT ACTGCTTCCC GCCAGAATCT
GGCCTACCGC CACTGTACGT TGTCTTCAAC TCTCCCTACC CCGGCGCGAC AACCAAAGGG
ACTTACAGTG GACGACCCTA CAACCCGGAT AAAGCTGGGG GACCTATCGA ACGACTGGAT
TGGAGGAAGA CTAAGATCAC AGCTGATGGC ATTGAGCTAG TCAAGCTACA CACAAGTCGT
TTCGAACCCT CCGATGCGAA CAAGATCATG ATCGATAGGC TGAAAAAAAT ACTACAAGGT
CAATTAGAAG CAACTGACAC TGACAAGCGA TTCTACACAC ATGAAATAAG AGAACTTGAG
CGCTTCCGGG CGCTTGAAAT CCCAGATAAA ATTAGGCCTG AAGATCGTGG CGAAGCATGG
AATAATACAC ATGCCGCAAC ACTGGAGGAC TACCAACTCA CTTCAGAACT TGAGCTATTA
TACACACCAG AAGCCATTGA GGCAGACGAC CGGCAGACTG CGCGAGAAAA TCAATGA
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| Protein sequence | MTSRTTMTAS EIGEIYSPAP FRYDFEYLLN WAEPFTLPLV PPDSAAFFSI GADSRDAEAK
AQKIINKIEA TRPSAPPGLK QYLDNHYSAI DARHTDELIR LQAKRQFLLD LQEKIIYKRL
PTDDFSGIHV YAPGLTPAYL FYTYIDPHIN VGKEFYIAQG FLFALMRSIT AAQIEILLGQ
SLKIIHRKIT TVNSKLAPTE KITSESNTIT FSITPSIQLS TTLGAIGNSH YHNRQLETTL
RSGRQLLARA AGAAASRLFN VGIGALLYSS ELGNSDLYHE TTLSLPADSL IPDLPDQLYE
KALSHGVAES TYRIYTRNDI YTLIKNQQTA SLESRVPLRP LYFDEATNSY ISVPSQKFPI
KLTLPAHTPG DTSTTKPGAQ IPSYPYRGVT LNPLHIEASP LPALEPEDFK DCIYCFPPES
GLPPLYVVFN SPYPGATTKG TYSGRPYNPD KAGGPIERLD WRKTKITADG IELVKLHTSR
FEPSDANKIM IDRLKKILQG QLEATDTDKR FYTHEIRELE RFRALEIPDK IRPEDRGEAW
NNTHAATLED YQLTSELELL YTPEAIEADD RQTARENQ
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