| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2035 |
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| Symbol | |
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| ID | 5869824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2282605 |
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| End bp | 2283627 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547160 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001668272 |
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| Protein GI | 167033041 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.12661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTGCT ACTTCCACCC CGAACAACTG CTGCACCACC CGCGCAGCTA CTACTCGCGC
GGCGCCATGC GCACCCCGCA GGAAGTCCCC GAGCGCGCCC AGCGGCTGTT GCAGGCCGCC
AAGGACCTGG GCTTCGACAT CCGCCAGCCC GACGATGCCG GCCTTGAACC GTTCAGGGCT
GTGCACGGTG AGGCCTATCT GGCCTTCCTC GAAGAGGCCC ATGCACGCTG GAAGGAAGTG
CCCGAGGACT GGGGCGACGA GGTCATGTCC AACATCTTCG TGCGTGAGCC CAACGCCTTG
CGTGGCATTC TCGCCCAGGC CGGGCGCTAC CTGGCGGATG GCAGCTGCCC TGTGGGCGAA
AACACCTGGC GCTCGGCTTA TTGGTCTGCG CAAAGCGCGG TGGCCGGGGC CAAGGCCATC
CTCGACGGCG AACCGGCTGC CTATGCGCTG TGCCGGCCAC CGGGGCACCA TGCGCGCTTC
GATGCGGCGG GCGGGTTCTG CTACATCAAC AACGCGGCTG TAGCTGCCCA GGCTTTGCGC
AGTCGTTATA GCCGCGTGGC GGTTCTTGAT ACCGACATGC ACCATGGGCA GGGGATTCAG
GAGATTTTCT ACGATCGCCG TGATGTGCTG TATGTGTCGG TGCATGGTGA CCCGACCAAC
TTCTACCCAG GCGTGGCTGG GTTCGCGGAC GAGCGGGGCT GTGGTGAAGG GGAGGGGTAC
AACCTGAACT TGCCGATGGC GCATGGGGCC AGTGAGGCTG ATTTCATGGG GCAGTTGGAC
GTTGCGCTAG CTGCAGTGAA GGACTTTGGT GCTGAGGCGC TGGTGTTGTC TTTGGGGTTC
GATATCTATG AGCTCGACCC GCAGAGCAAG GTGGCAGTGA CGACTGAAGG GTTTGCTGCG
TTGGGGGAGC GGATTCGTGC GTTGCGGTTG CCGTGTCTGA TCGTGCAGGA AGGCGGGTAT
CACCTGGACA GCCTGGAGGT GAATGCGCAG GCGTTCTTTG CTGGTAAGGC GGACTGGCGT
TAG
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| Protein sequence | MRCYFHPEQL LHHPRSYYSR GAMRTPQEVP ERAQRLLQAA KDLGFDIRQP DDAGLEPFRA
VHGEAYLAFL EEAHARWKEV PEDWGDEVMS NIFVREPNAL RGILAQAGRY LADGSCPVGE
NTWRSAYWSA QSAVAGAKAI LDGEPAAYAL CRPPGHHARF DAAGGFCYIN NAAVAAQALR
SRYSRVAVLD TDMHHGQGIQ EIFYDRRDVL YVSVHGDPTN FYPGVAGFAD ERGCGEGEGY
NLNLPMAHGA SEADFMGQLD VALAAVKDFG AEALVLSLGF DIYELDPQSK VAVTTEGFAA
LGERIRALRL PCLIVQEGGY HLDSLEVNAQ AFFAGKADWR
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