| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2019 |
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| Symbol | |
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| ID | 5869808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2266737 |
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| End bp | 2267627 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641547144 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001668256 |
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| Protein GI | 167033025 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.213038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTCA GTGGCAGATC TGGAGAGATG GAGGTTTTTG CCAGGGTGGC ACACGAGGGC
AGCCTATCGG CTGCCGCGCG GGCACTGAAC CTGACGCCCT CCGCGGTCAG CCGCATCCTC
GCCCGCACCG AACAGCGCCT GGGCACTCGC CTGCTGCTGC GCACCACCCG GGCGATCACC
CTCACCCCCG AGGGTGAGGC GTACTTGCGC GGCGCGCGGC GGGTGCTGGC AGACATGCTC
GAAGTCGAAG AGGCCATCAC TGACCAGGGC GTGCCACGCG GGCGCTTGCG GGTCAGCGCT
GCGCTGGGCC ATGCCCGGCT GACCGTCGTG CCGCTATTGG CAGCCTTCAG CGCGCGCTAC
CCGCAGGTGC TGGTCGACCT GACCCTCAGC GACGAGGTAG CCGACATTCT CGGCGGCCAG
GCCGACGTGG CGCTGCGTTT CGGGCACCTT CCGGACAGCT CGTTGAGCGC CCGTACCATT
GGCGAAACCG GCCAGGTGGT AGTTGCCTCA CCTGACTACC TGCAACGCTG CGGCACCCCG
CTTGAGCCTG AAGACCTGGC CCGGCACAAC TGCCTGCGCT TCAACTTCCG CCGCGCCGCC
CCCGACTGGC CGTTTCGTCG CGACGGGCAA ACGTTCTCGT TGAGGGTGGC GGGAAATATC
GAATGCAGCA GCGGTGAAGC CTTGGCGCAA CTGGCCAGGC TGGGTGCCGG CATCGCGCGG
ATCGGCACCT TCACCGTGGT CGATGACCTG GCCAGTGGGC GGCTGGTGCC GTTGCTCGAG
GCATACAACC CTGACGACCG CGAGCCGATC CATGCAGTGT TCGTCGGTGG CCCGGCGATG
CCCGCGCGAG TGCGGGTTTT TGTGGACTTT CTGATACAGC ACCTGTCCTA A
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| Protein sequence | MDFSGRSGEM EVFARVAHEG SLSAAARALN LTPSAVSRIL ARTEQRLGTR LLLRTTRAIT
LTPEGEAYLR GARRVLADML EVEEAITDQG VPRGRLRVSA ALGHARLTVV PLLAAFSARY
PQVLVDLTLS DEVADILGGQ ADVALRFGHL PDSSLSARTI GETGQVVVAS PDYLQRCGTP
LEPEDLARHN CLRFNFRRAA PDWPFRRDGQ TFSLRVAGNI ECSSGEALAQ LARLGAGIAR
IGTFTVVDDL ASGRLVPLLE AYNPDDREPI HAVFVGGPAM PARVRVFVDF LIQHLS
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