Gene PputGB1_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2003 
Symbol 
ID5869793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2255105 
End bp2255938 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content60% 
IMG OID641547130 
Producthypothetical protein 
Protein accessionYP_001668242 
Protein GI167033011 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.912952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCCG CACTGTTGAA TACTGGGTTG GGCTTGCGCC GTGGCCTGTT GCCGGAACTG 
CTCGCCATGG CGCCGGGTGC AGTGGACTTT CTCGAATGCG CGCCGGAAAA CTGGATTGCC
GTGGGCGGTG CCTACGGTAA GGGGTTGGCC GAGTTGGCGG AGCGTTTTCC CATCACCTGC
CATGGGTTGT CGTTGTCGTT GGGGGGGAGT GCGCCGCTGG ACTGGCAGTT CCTCGACCAG
ATCCGGCAGT TTCTCGATCG CCACCAAGTG CGCTTGTATA GCGAACACCT GAGCTACTGC
AGTGATGACG GGCACCTGTA CGACTTGATG CCCATCCCGT TCACCGATGA AGCGGTGCAC
CATGTGGCGG CGCGCATACG CCGGGCGCAG ACGCACCTGG AACGGCGTAT CGCTGTCGAG
AACATCAGCT ACTACGCCGC CCCTTACGCT GCGATGAGTG AACTTGAATT TATTCGTGCA
GTACTCGATG AAGCCGACTG TGACCTGCTG CTGGACGTCA ACAATGTATT CGTCAATGCC
TGCAATCACG GCTATGACGC CCGGGAATTC CTTGAAGGCT TGCCCCGGGC GCGGGTGACC
TGCATGCACA TTGCCGGTCA TTACGATGAG GCCCCGGACC TCAAGGTCGA CACCCATGGG
GCGCCGGTCA AGGAAGATGT CTGGGCACTG TACGCGTTCG CCTGTGAACG CTTTGGGGTG
CAGCCGACCG TGCTCGAACG TGACTTCAAC CTCCCCCCAC TGGCACAGCT GCTGGAGGAG
ACAGCACGTA TCCGTGACAT GCAGCGTAGC TGGGGAGGGC AGAGGCATGA ATGA
 
Protein sequence
MLPALLNTGL GLRRGLLPEL LAMAPGAVDF LECAPENWIA VGGAYGKGLA ELAERFPITC 
HGLSLSLGGS APLDWQFLDQ IRQFLDRHQV RLYSEHLSYC SDDGHLYDLM PIPFTDEAVH
HVAARIRRAQ THLERRIAVE NISYYAAPYA AMSELEFIRA VLDEADCDLL LDVNNVFVNA
CNHGYDAREF LEGLPRARVT CMHIAGHYDE APDLKVDTHG APVKEDVWAL YAFACERFGV
QPTVLERDFN LPPLAQLLEE TARIRDMQRS WGGQRHE