Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2003 |
Symbol | |
ID | 5869793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2255105 |
End bp | 2255938 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641547130 |
Product | hypothetical protein |
Protein accession | YP_001668242 |
Protein GI | 167033011 |
COG category | [S] Function unknown |
COG ID | [COG3220] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.912952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCCCG CACTGTTGAA TACTGGGTTG GGCTTGCGCC GTGGCCTGTT GCCGGAACTG CTCGCCATGG CGCCGGGTGC AGTGGACTTT CTCGAATGCG CGCCGGAAAA CTGGATTGCC GTGGGCGGTG CCTACGGTAA GGGGTTGGCC GAGTTGGCGG AGCGTTTTCC CATCACCTGC CATGGGTTGT CGTTGTCGTT GGGGGGGAGT GCGCCGCTGG ACTGGCAGTT CCTCGACCAG ATCCGGCAGT TTCTCGATCG CCACCAAGTG CGCTTGTATA GCGAACACCT GAGCTACTGC AGTGATGACG GGCACCTGTA CGACTTGATG CCCATCCCGT TCACCGATGA AGCGGTGCAC CATGTGGCGG CGCGCATACG CCGGGCGCAG ACGCACCTGG AACGGCGTAT CGCTGTCGAG AACATCAGCT ACTACGCCGC CCCTTACGCT GCGATGAGTG AACTTGAATT TATTCGTGCA GTACTCGATG AAGCCGACTG TGACCTGCTG CTGGACGTCA ACAATGTATT CGTCAATGCC TGCAATCACG GCTATGACGC CCGGGAATTC CTTGAAGGCT TGCCCCGGGC GCGGGTGACC TGCATGCACA TTGCCGGTCA TTACGATGAG GCCCCGGACC TCAAGGTCGA CACCCATGGG GCGCCGGTCA AGGAAGATGT CTGGGCACTG TACGCGTTCG CCTGTGAACG CTTTGGGGTG CAGCCGACCG TGCTCGAACG TGACTTCAAC CTCCCCCCAC TGGCACAGCT GCTGGAGGAG ACAGCACGTA TCCGTGACAT GCAGCGTAGC TGGGGAGGGC AGAGGCATGA ATGA
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Protein sequence | MLPALLNTGL GLRRGLLPEL LAMAPGAVDF LECAPENWIA VGGAYGKGLA ELAERFPITC HGLSLSLGGS APLDWQFLDQ IRQFLDRHQV RLYSEHLSYC SDDGHLYDLM PIPFTDEAVH HVAARIRRAQ THLERRIAVE NISYYAAPYA AMSELEFIRA VLDEADCDLL LDVNNVFVNA CNHGYDAREF LEGLPRARVT CMHIAGHYDE APDLKVDTHG APVKEDVWAL YAFACERFGV QPTVLERDFN LPPLAQLLEE TARIRDMQRS WGGQRHE
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