| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1999 |
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| Symbol | |
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| ID | 5869789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2246698 |
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| End bp | 2249058 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547126 |
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| Product | DNA polymerase II |
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| Protein accession | YP_001668238 |
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| Protein GI | 167033007 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.449398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTTGC AGCAGGGCTT TGTCCTGACC CGGCATTGGC ATGACACGCC CGAAGGCACT
TGCGTGGAGT TCTGGCTGGC CACCGATCAG GGGCCGCGGC AGCTGCGCCT GGCGCCCCAG
GAGTCGGTGG CGTTCATCCC CCAGGCGCAG GCTGAGCATG CCCGTGTTCT GCTGTCCAAG
GAGCCTGGCG TTCAGCTCAA GCCGCTGCGG CTGAAGGACT TCGACCAGCG CCCGGTGCTT
GGCCTGTATT GCCGCCAACA CCGGCAACTG ATGCAGCTGG AGCAACGCCT GCGCAGCGCG
GGTATCGAGG TGTACGAGGC CGATATCCGC CCGCCCGAGC GCTATCTGAT GGAGCGCTTC
ATCACCGCCC CTGTGCAGTT CACCGGTCAG CCGAATGCCC AGGGCGTTTA TTGCGACGCC
CAGCTCAAGC CTTTGCCCGG CTATCGCCCA CCGCTGCGTC TGGTGTCGCT GGATATCGAG
ACCAGCGAAC GGGGAGAGTT GTACAGCATT GCCCTGGAAG GGTGTGGCCA GCGTCAGGTG
TACATGCTTG GCCCGGCCAA CGGCGACGCT GATGGCGTCG ACTTCGCTCT GCACTATTGC
GATGACCGTG CCGCGTTGCT CGACTGCCTC AACCAATGGA TGGCCACGCA CGATCCGGAT
GCGATCATCG GCTGGAACCT GATCCAGTTC GACCTGCGCC TTTTGCATGA ACACGCCAAA
CTGTTGCAGG TACCGCTGGC ATTAGGCCGC AACGGTGCCC CCATGACCTT GCGCAGCCAC
GCCGGGGGCG GCCATGTATT CGCCGACGCA CCGGGGCGGC TGTTGATCGA TGGCATCGAA
GCACTGCGCT CGGCGACCTG GAGCTTTCCG TCGTTCAGCC TGGAAAGTGT TGCGCAGACC
CTGCTCGGAG AAGGCAAGGC CATCGACACG CCGTACCAGC GCATGGATGA AATCAACCGC
CGTTTCGCCG AAGACAAACC GGCACTGGCA CGCTACAACC TCAAGGACTG CGAGCTGGTC
ACCCGCATCT TCGCCCATAC CCGCCTGCTC GAGTTCCTGC TGGAGCGTGC TTCGGTCACC
GGGCTGGCGG TAGACCGCAG CGGTGGTTCG GTGGCCGCTT TCTGTCACCT GTACATCCCG
CAGATGCACC GTTTGGGCTT TGTCGCCCCC AACCTCGGCA GCCGCCCCGA TGAAGCCAGC
CCCGGTGGCT TTGTCATGGA TTCGCGTCCA GGCCTGTACG ACTCGGTGCT GGTGCTGGAC
TACAAGAGCC TCTACCCGTC GATCATCCGT ACTTTTCTGA TCGACCCGGT TGGGCTGGTC
GAGGGGCTGC GCTTGCCCGA CGATGAGCAT TCGGTGGAGG GCTTTCGCGG TGGGCGTTTC
TCGCGCAGCC AGCATTGCCT GCCGGCCATT GTCGAGCGTG TCTGGCAGGG CCGGGAAGCG
GCCAAGCGTG AGGGCAATGC GCCGCTGTCG CAGGCACTGA AGATCATCAT GAATGCCTTT
TATGGGGTGT TGGGGTCGAG CGGTTGCCGT TTCTTCGACC CGCGCCTGGC CTCGTCGATC
ACCATGCGCG GTCACCAGAT CATGCGCCAG ACTCGCACGC TGATCGAGGC CAGGGGTTAT
GAGGTCATCT ATGGTGACAC CGACTCCACC TTCGTCTGGC TCAAAGGTGC CCATGACGAA
GCAGCCGCGG CGCAGATCGG CCGCGAACTG GTGGCTCAGG TCAACCAGTG GTGGCGTGAG
CACCTGCGCC AGCAGATGAA CCTGCAAAGC GCGCTGGAGC TGCAGTTCGA GGTGCATTAT
CGGCGGTTTC TGATGCCTAC CATTCGTGGT GCCGATGAGG GTAGCAAGAA GCGTTATGCC
GGCTTGGTGC AGCGTGCCGA CGGCAGCGAG GATGTGGTCT ACAAGGGCCT GGAGTCGGTG
CGCACCGACT GGTCGCCACT GGCGCAGCAG TTTCAACAGG CGCTGTTTGG GCGAATCTTT
CGCGGCCAGC CGTACCGCGA CTATGTGCGC CTTTACGTGC AGCAGACCCT GGCGGGCGAA
CTGGACGACC TGCTGGTGTA TCGCAAGCGC CTGCGCCGGC CGCTGGCTGA CTACCAGCGC
AACGTGCCAC CTCATGTGCG TGCCGCACGC CAGGCCGATG AGTACAACAG CAGCCTCGGC
CGCCCCCGTC AGTACCAGCG CGGTGGCTGG ATCAGTTACG TCATTACCAC CGCCGGCCCC
GAGCCGATGG AGAACCTGCA ATCGCCGATC GACTACGAAC ACTACCTCAG CCGGCAGTTG
CAGCCGGTGG CCGATGCCAT CCTGCCGTTC GTTGGCGATG ACTTCGCCAC CTTGACCGGT
CGCCAGTTAC AACTGTTCTG A
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| Protein sequence | MELQQGFVLT RHWHDTPEGT CVEFWLATDQ GPRQLRLAPQ ESVAFIPQAQ AEHARVLLSK
EPGVQLKPLR LKDFDQRPVL GLYCRQHRQL MQLEQRLRSA GIEVYEADIR PPERYLMERF
ITAPVQFTGQ PNAQGVYCDA QLKPLPGYRP PLRLVSLDIE TSERGELYSI ALEGCGQRQV
YMLGPANGDA DGVDFALHYC DDRAALLDCL NQWMATHDPD AIIGWNLIQF DLRLLHEHAK
LLQVPLALGR NGAPMTLRSH AGGGHVFADA PGRLLIDGIE ALRSATWSFP SFSLESVAQT
LLGEGKAIDT PYQRMDEINR RFAEDKPALA RYNLKDCELV TRIFAHTRLL EFLLERASVT
GLAVDRSGGS VAAFCHLYIP QMHRLGFVAP NLGSRPDEAS PGGFVMDSRP GLYDSVLVLD
YKSLYPSIIR TFLIDPVGLV EGLRLPDDEH SVEGFRGGRF SRSQHCLPAI VERVWQGREA
AKREGNAPLS QALKIIMNAF YGVLGSSGCR FFDPRLASSI TMRGHQIMRQ TRTLIEARGY
EVIYGDTDST FVWLKGAHDE AAAAQIGREL VAQVNQWWRE HLRQQMNLQS ALELQFEVHY
RRFLMPTIRG ADEGSKKRYA GLVQRADGSE DVVYKGLESV RTDWSPLAQQ FQQALFGRIF
RGQPYRDYVR LYVQQTLAGE LDDLLVYRKR LRRPLADYQR NVPPHVRAAR QADEYNSSLG
RPRQYQRGGW ISYVITTAGP EPMENLQSPI DYEHYLSRQL QPVADAILPF VGDDFATLTG
RQLQLF
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