| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1989 |
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| Symbol | |
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| ID | 5869779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2238046 |
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| End bp | 2238879 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641547116 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001668228 |
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| Protein GI | 167032997 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.753386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGC CCCTGCGCGA GCAGACACAC CTCTGGCAGG CGCCGGCCCT GGGCGACGTC
GAGATGCTGC ACGCGCGCTA TTTCCAGCAG CGCTTTGCCC CGCATGTGCA CGAAGGCTAT
GTGTTCACCG TGATCGAGTC CGGCGCCCAG CGTTTCTGGC ACCGTGGCAG CGAGCACTTG
GCGCCGGTCG GCAGCATGGT GCTGATCAAC CCCGACGAGC TGCATACCGG CGCCACAGCC
CACGAAGCGG GGTGGCGCTA CCGCGGCTTC TACCCCGAGC ACGCGCGGGT CACGGGCGTG
CTCGACGAAT TGGAGCTGGG CCGCCATGGC ATGCCGAGCT TCAAGGACAG CGTGATCCAT
GACGCGGCCC TGGCGATCGC CTTCAGCCAG CTGCATCAGC TGTCCGAAAC TGGCGCCAGT
GCCCTGCAAC AGCAGACCGC CTGGCGTCAG GCGGTGCTGG CCTTGGTGCA ACGACACGGG
CAATGCGCTG AACCCTCTGC CCCCGGCCAC GAGCCACTGG CCGTGGCCCG CGCCCGCGAA
CTGCTGGAAA GCCAACTGGC CGACCCACCC TCGCTCGAAG CGCTGGCGGC GGCGGTCAAC
CTGTCGCCGT TCCATTTCGC CCGGGTGTTT CGCCAGGCCA CCGGCCTGCC GCCGCACGCC
TGGCTGAAGC AGCGGCGCCT GGCCCGCGCG CGGGAAATGT TGAAGTGCGG CTTTGCTGCT
TCGCAGGTGG CGTTCGACCT GGGGTTTGCC GACCAGAGCC ATTTGAGCCG GCAATTCAAG
CAGGCATACG GGGTGACACC CGGGGCCTAT CGCAGCGCTT GCCTGCAAGG CTGA
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| Protein sequence | MNTPLREQTH LWQAPALGDV EMLHARYFQQ RFAPHVHEGY VFTVIESGAQ RFWHRGSEHL
APVGSMVLIN PDELHTGATA HEAGWRYRGF YPEHARVTGV LDELELGRHG MPSFKDSVIH
DAALAIAFSQ LHQLSETGAS ALQQQTAWRQ AVLALVQRHG QCAEPSAPGH EPLAVARARE
LLESQLADPP SLEALAAAVN LSPFHFARVF RQATGLPPHA WLKQRRLARA REMLKCGFAA
SQVAFDLGFA DQSHLSRQFK QAYGVTPGAY RSACLQG
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