Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1985 |
Symbol | |
ID | 5869775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2235815 |
End bp | 2236399 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641547112 |
Product | IscR-regulated protein YhgI |
Protein accession | YP_001668224 |
Protein GI | 167032993 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [S] Function unknown |
COG ID | [COG0316] Uncharacterized conserved protein [COG0694] Thioredoxin-like proteins and domains |
TIGRFAM ID | [TIGR03341] IscR-regulated protein YhgI |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.858904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.779862 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTA TAACCATTAC CGACGCCGCC CATGACTACC TGGCCGATCT GCTTTCCAAG CAGAATACGC CTGGCATCGG CATTCGCATT TTCATCACCC AGCCGGGCAC CCAGTACGCA GAGACGTGCA TTGCCTACTG CAAGCCGGGC GAAGAGAAGC CTGACGACAC CGCCGTGGGT CTGAAGAGCT TCACTGCTTA CCTGGACGCA GTCAGCGTGC CATTCCTGGA AGACGCGCTG GTCGACTACG CCACCGATCG CATGGGTGGT CAGCTGACCA TCAAGGCGCC GAACGCCAAG GTGCCGATGG TCAACGAAGA CAGCCCGATC AACGAGCGCA TCAACTATTA CCTGCAGACC GAGATCAACC CCGGCCTGGC CAGCCATGGC GGCCAGGTGA GCCTGGTGGA CGTGGTTGAC GACGGCATTG CCGTGCTGCA ATTCGGTGGT GGCTGCCAGG GCTGTGGCCA GGCCGACGTC ACCCTGAAAG AAGGCATCGA ACGCACCTTG CTCGAGCGTA TTCCGGAGCT CAAAGGCGTA CGTGACGTGA CTGACCACAC GCAGAAAGAG AACGCCTACT ACTAA
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Protein sequence | MSAITITDAA HDYLADLLSK QNTPGIGIRI FITQPGTQYA ETCIAYCKPG EEKPDDTAVG LKSFTAYLDA VSVPFLEDAL VDYATDRMGG QLTIKAPNAK VPMVNEDSPI NERINYYLQT EINPGLASHG GQVSLVDVVD DGIAVLQFGG GCQGCGQADV TLKEGIERTL LERIPELKGV RDVTDHTQKE NAYY
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