Gene PputGB1_1985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1985 
Symbol 
ID5869775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2235815 
End bp2236399 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content60% 
IMG OID641547112 
ProductIscR-regulated protein YhgI 
Protein accessionYP_001668224 
Protein GI167032993 
COG category[O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID[TIGR03341] IscR-regulated protein YhgI 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.858904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.779862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTA TAACCATTAC CGACGCCGCC CATGACTACC TGGCCGATCT GCTTTCCAAG 
CAGAATACGC CTGGCATCGG CATTCGCATT TTCATCACCC AGCCGGGCAC CCAGTACGCA
GAGACGTGCA TTGCCTACTG CAAGCCGGGC GAAGAGAAGC CTGACGACAC CGCCGTGGGT
CTGAAGAGCT TCACTGCTTA CCTGGACGCA GTCAGCGTGC CATTCCTGGA AGACGCGCTG
GTCGACTACG CCACCGATCG CATGGGTGGT CAGCTGACCA TCAAGGCGCC GAACGCCAAG
GTGCCGATGG TCAACGAAGA CAGCCCGATC AACGAGCGCA TCAACTATTA CCTGCAGACC
GAGATCAACC CCGGCCTGGC CAGCCATGGC GGCCAGGTGA GCCTGGTGGA CGTGGTTGAC
GACGGCATTG CCGTGCTGCA ATTCGGTGGT GGCTGCCAGG GCTGTGGCCA GGCCGACGTC
ACCCTGAAAG AAGGCATCGA ACGCACCTTG CTCGAGCGTA TTCCGGAGCT CAAAGGCGTA
CGTGACGTGA CTGACCACAC GCAGAAAGAG AACGCCTACT ACTAA
 
Protein sequence
MSAITITDAA HDYLADLLSK QNTPGIGIRI FITQPGTQYA ETCIAYCKPG EEKPDDTAVG 
LKSFTAYLDA VSVPFLEDAL VDYATDRMGG QLTIKAPNAK VPMVNEDSPI NERINYYLQT
EINPGLASHG GQVSLVDVVD DGIAVLQFGG GCQGCGQADV TLKEGIERTL LERIPELKGV
RDVTDHTQKE NAYY