| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1983 |
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| Symbol | |
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| ID | 5869773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2232314 |
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| End bp | 2234614 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547110 |
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| Product | fatty acid cistrans isomerase |
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| Protein accession | YP_001668222 |
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| Protein GI | 167032991 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.346862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCATC GTATCCTTGC CGGCGCCTTC GCCCTGCTCA TCAGCGGCGC GGTGTTCGGG
CAAGCCCCCC AGTCGAGCCC GGCTATTTCC TACACCCGGG ACATTCAACC GATCTTCACC
GAGAAGTGCG TGGCCTGCCA CGCCTGCAAC GACGCCGCTT GCCAGCTGAA GCTGGAAAGC
CCCGAAGGCG CGGTGCGCGG GGCCAGCAAG GTGCCGGTGT ACCAAGGCGA GCGCAGCAAG
GCGGTGCCCC CCACCCGGCT GTTCTATGAC GCCCACAGCG AAGAGCAATG GCGCAAGAAG
GGCTTCTACT CGGTGCTCGA CAACCAGGGC AGCCAGGCCG CGCTGATGGC GCGCATGCTG
GAGCTGGGTC ACAAGACCCC GCTCACGCCC AACGCCAAGC TGCCCGAGGA GATCGTCCTG
GGCCTGAGCC GCAACAACAT GTGCCCGTTG CCCCATGAGT TCGACGCCTA TGCCGGCGCC
CACCCCAAGG AGGGCATGCC GCTGGCGGTA ACCGGGCTGA CCGACAAGGA ATACGACACC
ATGCGCCGAT GGCTGGCGGC CGGTGCGCCA GTGGAGTACC AGCCGATCCA GCCGAGCGCT
GCCGAAGCCA GGCAGATCAG CGATTGGGAA GAACTGCTCA ACCGCCCCGG TTCCACCGAG
GCGCTGGTTG GCCGCTGGCT ATACGAGCAC CTGTTCCTGG CGCACATCTA TTTCGTTGGC
GGCGAGCAGG GCCACTTCTT CCAGTGGGTG CGCTCGCGCA CGCCAAGTGG CAAGCCCGTC
GACATCATTG CGACCCGTCG CCCCAACGAC CCGCCGGGCA CCGACTTCTA CTACCGGCTG
ATCCCGGTAC AGGGCGTGAT CGTGCACAAA ACGCACATCA CCTACCCGAT GGGGCCGCAG
AAGCTCAAGC GGGTGAAGCA GTTGTTCTAC GCCGGTGACT GGCATGCCGC CGCGCTGCCA
GGCTACGGCC CGCGCCACCG GGCCAACCCG TTCGAAACCT TCGAGGCGAT CCCGGCGGTG
GCGCGCTACC AGTTCATGCT GGATAACGCC GAATACTTCG TGCGCACCTT CATCCGTGGC
CCGGTGTGCC GCGGGCAGAT TGCCACCGAC GTGATCCGCG ACAATTTCTG GGCGCTGTTC
CAAGAGCCGG CCTTTGATCG CTACATCACC GATGCCAAGT ACCGGGGCGA GGCTACGCCA
TTGCTGGCCA TGCCGGGGCA GATCGATGAT GTGGGCAGTG TGCTGAGCCT GTGGCACGCC
TACCGCGACA AGCGCAACGA GTACGAGAAA CTGCGCCGTG AAGCCTATGC CGACATGCCA
GCACCCGGTT GGTCGACCTT GTGGGCCGGT AACGACAACG CGTTGCTGAG CATCTTCCGC
CACTTCGACA GCGCCTCGGT GACCAAGGGC CTGATCGGTG ATGTGCCGCT GACCGTGTGG
CTGTTCGACT ACCCGTTGTT CGAGCGCACT TATTATCAGT TGGCGGTCAA CTTCGATGTG
TACGGCAACG TTTCTCACCA GTTGCAGACA CGCCTGTACT TCGACCTGAT CCGCAACGGC
GCCGAGGTCA ACTTCCTGCG CCTGATGCCT GCCGACCAGC GCAAGGCGAT CCTCGGCGAC
TGGTACCAGA ACAGCGGCAA GGTGAAGATG TGGATGGATT ACGAGGACAT CGACACCGAT
ACCCCGAGCG GTATCAAGCT TGATGCGCAC AACCCCAAGC GTGACTTTGG CCTGAAGCTG
CTGCAGCGCA CCGGCAGCCT GAATGCCGCG CCGGACCCGA TCAACCGCTG CCAGGGTGCG
TTCTGCTCGC GGGCGCAGGT GAGCGAGGAG TTCCGCAATG CCGAGCAGTC GCTCAGCCGC
CTGGTGTCGC GCCCGGCTGC CGGGCTGAAG GTGATCAACC AGTTGCCCGA GGCGACCATG
TTGCGCATCG AAGGGCAGGG CGGGCAGCGC CAGGTTTACA GCCTGCTGCG CAACCGCGCG
CATAGCAATG TGGCGTTCCT GTTGGGCGAG GCGTACCGCT ACCAGCCAGG GCTGGACACG
CTGACCCTGT ACCCTGGGGT GCTCAGCAGC TACCCGAACT TCATCTTCAA TATCCCGACC
AAGGATGTGC CGGAGTTCGT CGAGGATATG GAATATGCAA AAGATGATGC GGCGAAGTTC
GAGCGCATTG TCATGCGCTG GGGCGTGCGC CGCAGTCACC CCGAGTTCTG GCGCTATTTC
CATGACTTGA ACAGCTTCAT CAAGGAGACC GAACCGGTCG AAGCCGGGGT ACTGGACATG
AACCGCTATG AGAACCTCTG A
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| Protein sequence | MVHRILAGAF ALLISGAVFG QAPQSSPAIS YTRDIQPIFT EKCVACHACN DAACQLKLES
PEGAVRGASK VPVYQGERSK AVPPTRLFYD AHSEEQWRKK GFYSVLDNQG SQAALMARML
ELGHKTPLTP NAKLPEEIVL GLSRNNMCPL PHEFDAYAGA HPKEGMPLAV TGLTDKEYDT
MRRWLAAGAP VEYQPIQPSA AEARQISDWE ELLNRPGSTE ALVGRWLYEH LFLAHIYFVG
GEQGHFFQWV RSRTPSGKPV DIIATRRPND PPGTDFYYRL IPVQGVIVHK THITYPMGPQ
KLKRVKQLFY AGDWHAAALP GYGPRHRANP FETFEAIPAV ARYQFMLDNA EYFVRTFIRG
PVCRGQIATD VIRDNFWALF QEPAFDRYIT DAKYRGEATP LLAMPGQIDD VGSVLSLWHA
YRDKRNEYEK LRREAYADMP APGWSTLWAG NDNALLSIFR HFDSASVTKG LIGDVPLTVW
LFDYPLFERT YYQLAVNFDV YGNVSHQLQT RLYFDLIRNG AEVNFLRLMP ADQRKAILGD
WYQNSGKVKM WMDYEDIDTD TPSGIKLDAH NPKRDFGLKL LQRTGSLNAA PDPINRCQGA
FCSRAQVSEE FRNAEQSLSR LVSRPAAGLK VINQLPEATM LRIEGQGGQR QVYSLLRNRA
HSNVAFLLGE AYRYQPGLDT LTLYPGVLSS YPNFIFNIPT KDVPEFVEDM EYAKDDAAKF
ERIVMRWGVR RSHPEFWRYF HDLNSFIKET EPVEAGVLDM NRYENL
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