Gene PputGB1_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1977 
Symbol 
ID5869767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2224345 
End bp2224839 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content63% 
IMG OID641547104 
Producthypothetical protein 
Protein accessionYP_001668216 
Protein GI167032985 
COG category[S] Function unknown 
COG ID[COG3749] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0622513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGAA TCATTAAGAA CAACCAGATC GTCGACGAAA CCTGGCACCT GCTGCCCAAG 
GAAACGTCCT TTGACGAGCT GACCAACTGC GACGACTACA TCGTCCCGCT GCAGATGTGG
CGCGACCATG CCCACGTGCT CAAGGCCCGC GATGGCGGGC TGGGTGTGTG GCTGGACAGC
GACCAGGAAG CGGAAGAGAT CGGCGAAGAC GTGCAGCACT TCCAGGTCAT CGCCCTGAAC
TTCCCGGCAT TCACCGACGG GCGCAGCTAC TCCAATGCGC GCCTGCTGCG CGACCGCTAC
AAGTTCAAGG GCGAGCTGCG CGCCATCGGC GATGTGCTGC GTGACCAGCT GTTCTTCATG
GCCCGTTGCG GCTTCGATGC GTTCGCCATC CGTGCCGACA AGGACCCGGA AGACGCGCTG
CAAAGCCTGA AAGACTTCTC GGTGACCTAC CAGGCCGCCA CTGACGAGCC GCTGCCGCTG
TTCCGCCGCC GCTGA
 
Protein sequence
MQRIIKNNQI VDETWHLLPK ETSFDELTNC DDYIVPLQMW RDHAHVLKAR DGGLGVWLDS 
DQEAEEIGED VQHFQVIALN FPAFTDGRSY SNARLLRDRY KFKGELRAIG DVLRDQLFFM
ARCGFDAFAI RADKDPEDAL QSLKDFSVTY QAATDEPLPL FRRR