| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1968 |
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| Symbol | |
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| ID | 5869758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2213284 |
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| End bp | 2214516 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641547095 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001668207 |
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| Protein GI | 167032976 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.620228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0550042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCT CTACCGCCTC CATGGCCACC GCCACGCCTG CCGACCAGCC TCAGGGCTTC
GCGGTCCGTA TCGTCGGTGC CGCCGCATTC GCCCACTTGC TCAACGACTT GATCCAGGCC
GTACTGCCGT CGATCTACCC GATGCTGAAA AGCGATTTCG CGCTGAGCTT CGCCCAGATC
GGCTGGATCG CCTTGATCTA CCAGGTGACC GCCTCGCTGC TGCAACCTTG GGTCGGCATG
TTCACCGACA AGCACCCACA ACCCTACCTG CTGCCGGCCG GCATGTTGGT GACACTGGTG
GGCATCGCCC TGCTCGCCTT TGCCGGCAGC TATGAAATGC TGCTGGTGGC GGCCGCCGTG
GTCGGCGTGG GCTCGGCGAC CTTCCACCCC GAAGCCTCGA GGGTGGCCAG GATGGCCTCC
GGCGGGCGCT TCGGCACCGC GCAATCCGCC TTTCAGGTCG GCGGCAATAC CGGCTCGGCC
CTCGGCCCGC TGCTCACCGC CGCCGTCGTC ATTCCGCACG GCCAGCCAGC CATTGCCTGG
TTCATGCTCG CAGCCGCGCT GGCGGTAATG GTGCTGCTGC GGGTGACCGG CTGGAGCGTG
CGTCACGGCC AGGCCCGGCT CAAGACCTTC GCCAGCCAGC AGGCGCCCGG GTTGTCGCGC
AACGCCATGT GGCGCGCGGT GGTGGTAATC GCCGTGCTGA TGTTCGCCAA GTTCGTCTAC
ATCGCTTCGT TCACCAACTT CTTCACCTTC TACCTCATCG AGCATTTCGG CCTGAGCGTG
CAACACAGCC AACTGTACCT GTTCGTGTTC CTCGCAGCCG TGGCGCTGGG CACCTTTGCC
GGCGGCCCGG TGGGTGACCG TATCGGGCGC AAGGCAGTGA TCTGGGTCTC GTTCCTCGGC
GTGGCGCCCT TCGCACTCGC CCTGCCCCAT GCCAACCTGG CCTGGACAGC GGTACTGGCA
GTGGCCATCG GCCTGGTGAT GTCCTCGGCT TTCGCAGCGC TGGTGGTGTA TGCCCAGGAG
GCAGTGCCAG GCCGGGTCGG CATGGTCTCG GGAGTGATGT TCGGGCTGAT GTTCGGCATC
AGCGGTATCG GTGCCGCCGG CCTCGGCGAG CTGGCCGACC GGTATGGCAT CGAGTGGGTG
TACCAGGCCA TCGCCTTCCT GCCGCTGCTG GGGCTGGCCA CCGCACTGCT GCCGGCTACC
CGCTCACAAG CCCGGCCCAG CCGTTGCTGC TAA
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| Protein sequence | MTTSTASMAT ATPADQPQGF AVRIVGAAAF AHLLNDLIQA VLPSIYPMLK SDFALSFAQI
GWIALIYQVT ASLLQPWVGM FTDKHPQPYL LPAGMLVTLV GIALLAFAGS YEMLLVAAAV
VGVGSATFHP EASRVARMAS GGRFGTAQSA FQVGGNTGSA LGPLLTAAVV IPHGQPAIAW
FMLAAALAVM VLLRVTGWSV RHGQARLKTF ASQQAPGLSR NAMWRAVVVI AVLMFAKFVY
IASFTNFFTF YLIEHFGLSV QHSQLYLFVF LAAVALGTFA GGPVGDRIGR KAVIWVSFLG
VAPFALALPH ANLAWTAVLA VAIGLVMSSA FAALVVYAQE AVPGRVGMVS GVMFGLMFGI
SGIGAAGLGE LADRYGIEWV YQAIAFLPLL GLATALLPAT RSQARPSRCC
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