| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1962 |
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| Symbol | |
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| ID | 5869752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2205760 |
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| End bp | 2208057 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547089 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001668201 |
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| Protein GI | 167032970 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.120798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAGCC CAGGGCTGGC GTTGGCCGAC GACCTGCCCC CACCGCCCAC GGAGATGTCC
GCCATCGCCG AAGCCACCCT GTACCTCGAC CTGGTAGTGA ACCAGATGCC CAGGGCTGAA
CTGGTCCCGG TGCAGCAGCG GGCCGGGCAG CTGTACCTGG ACAGCGACAT CTTGCGGTCA
GCCGGTATTT CGTTGCCTGG CAGCCCCCAG GGCGAGGTGG CCCTGGAAAG CATCGCGGGG
TTGCATGCCG ACTACGACAG CCAGAACCAG CGCCTGCTGC TGCAGGTGCC GCCGGCCTGG
TTGCCAGACC AGCAAGTGGG TGACCGCAAC CTGTACCCGG CCAGTGATGC GCGCAGCAGT
TTCGGCGCTT TGTTCAACTA CGACCTGTAC CTCAATGACA CCGATGAAGG CGGTACCTAC
CTGGCCGCCT GGAACGAGCT GCGCCTGTTT GACAGCTGGG GCACTTTCTC CAGTACCGGG
CAGTGGCGCC AGTCATTCAA CGGCGCACAG GCGGATGATA CGCGCCAAGG CTTCATGCGT
TATGACACTA CTTGGCGCTT CACTGACGAG CAGCGTCTGC TGTCTTATGA AGCCGGTGAC
TTCGTGACTG GCGCTTTGCC CTGGAGCAGC TCGGTGCGGG TGGGCGGCGT GCAGCTGTCG
CGTGACTTCG CTGCGCGCCC CGACCTGGTC ACTTACCCGT TACCGGCGTT CGCAGGCGAA
GCGGCGGTGC CGACGTCGCT CGACCTGTTC ATAAACGGTT TCAAGTCCAG CACTACCGAG
CTGCAGCCAG GCCCGTACAC CCTGACCAAC GTGCCGTTCA TCAACGGCGC CGGGGAGGCG
GTGGTGGTCA CCACCGATGC GCTTGGCCGG CAGGTGTCGA CGACCTTGCC GTTCTATGTC
ACCAGCAGCC TGCTGCAGAA GGGGCTGACG GACTACTCGG TGGCCGCCGG CAGCCTGCGC
CGTGATTACG GCGTGCGCGA TTTCAGCTAT GGGCCGGGTG TGGCCTCGGG CAGCCTGCGC
TATGGGCTCA GTGACTTCTT CACCCTCGAA ACCCACGCCG AAACTGCCGA GTCGCTGATG
CTGGGCGGGC TGGGTGGCAA CATGCGGCTG GGCAACTTCG GCGTGCTCAA TGCCGCCCTG
GCGCAAAGCC AGTTCGATGG CGAGAAGGGC CACCAGGTCG CCCTTGGGTA CCAGTACAAC
AGCCAGCGCA TCGGCTTCAG TTACCAGCGC CTGCAACGCC ATGGTGACTA TGCCGACCTG
ACCCGGGTCG ACCTTCCGGA CATGCAGTTG AGCAAGCGCA GCGAACAGGT CACCCTCAGC
CTGAACCTGA ACGAGTACGG CAGCATTGGC GCCGGCTACT TCGATGTACG CGCCGGTGAC
GGCACGCGTA CCCGGCTGAT CAACCTGAGC TACAGCAAGC CGCTGTGGGG CAGCAGCAGC
GTGTACTTGT CGGCCAACCG CGAAGTGGGT GACAGCCAGT GGGCGGTGCA GGCGCAGTTG
GTGATTCCGT TCGACTTGCA CGGCACCCTG GCGCTGGGCA TGGAGCGAAG TAAAGAAGGC
GAGACACTGC AGCGGGTCAA CTACAGCCAC GCGGTGCCAG CGGGTGTCGG CGTTGGTTAC
AACCTGGGCT ATGCCGCAGG CAGCGACCGG GATGCCTATC GCCAGGCCGA CGTCACTTGG
CGCCTGCAAT CGGTGCAGTT GCAGGCGGGT GTGTATGGCA GTAGCGGTGA AATGACCCGT
TGGGCTGACG CCAGTGGTTC TCTGGTGTGG ATGGATGCCG GGGTGTTCGC AGCCAACCGC
ATCGATGATG CCTTCGTAGT GGTCAGTACC GCGGGCTACG CCGATGTGCC GGTGCGCTAC
GAAAACCAGG ACGTTGGCCG CACCGATGCC AAGGGGCACT TGCTGGTGCC GTACAGCAGC
GGTTACTACC GTGGCAAGTA CGAAATCGAC CCCATGGACC TGCCGCCGGA TGTGCTGGCG
CCAGACGTGG AGCAGCGTGT GGCGGTAAGA CGGGGCAGCG GTTACTTGCT GGAGTTCCCG
CTCAAGCGGG TCATGGCGGC CAGCGTCGAG CTGGTGGATG GCGACCAGCA GGTGCTCAAA
TTGGGTAGCC GTGTGACCCA CACAGAAAGT GGCGGCCAGG CGGTGGTGGG TTGGGACGGG
TTGGTTTACC TGGAGAACTT GTCGCCGCAT AACCGCTTGC AGGTGGAAAT TGAAGGCGGC
GGGCATTGCG AGGTGGCATT CGACCTGCCT GAGTCACAAG GCTCGGTGCC CTTGATTGGC
CCGCTGGTGT GCCGATGA
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| Protein sequence | MVSPGLALAD DLPPPPTEMS AIAEATLYLD LVVNQMPRAE LVPVQQRAGQ LYLDSDILRS
AGISLPGSPQ GEVALESIAG LHADYDSQNQ RLLLQVPPAW LPDQQVGDRN LYPASDARSS
FGALFNYDLY LNDTDEGGTY LAAWNELRLF DSWGTFSSTG QWRQSFNGAQ ADDTRQGFMR
YDTTWRFTDE QRLLSYEAGD FVTGALPWSS SVRVGGVQLS RDFAARPDLV TYPLPAFAGE
AAVPTSLDLF INGFKSSTTE LQPGPYTLTN VPFINGAGEA VVVTTDALGR QVSTTLPFYV
TSSLLQKGLT DYSVAAGSLR RDYGVRDFSY GPGVASGSLR YGLSDFFTLE THAETAESLM
LGGLGGNMRL GNFGVLNAAL AQSQFDGEKG HQVALGYQYN SQRIGFSYQR LQRHGDYADL
TRVDLPDMQL SKRSEQVTLS LNLNEYGSIG AGYFDVRAGD GTRTRLINLS YSKPLWGSSS
VYLSANREVG DSQWAVQAQL VIPFDLHGTL ALGMERSKEG ETLQRVNYSH AVPAGVGVGY
NLGYAAGSDR DAYRQADVTW RLQSVQLQAG VYGSSGEMTR WADASGSLVW MDAGVFAANR
IDDAFVVVST AGYADVPVRY ENQDVGRTDA KGHLLVPYSS GYYRGKYEID PMDLPPDVLA
PDVEQRVAVR RGSGYLLEFP LKRVMAASVE LVDGDQQVLK LGSRVTHTES GGQAVVGWDG
LVYLENLSPH NRLQVEIEGG GHCEVAFDLP ESQGSVPLIG PLVCR
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