Gene PputGB1_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1946 
Symbol 
ID5869735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2188682 
End bp2188996 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content63% 
IMG OID641547072 
Productpeptidase 
Protein accessionYP_001668185 
Protein GI167032954 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00953564 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCACT TACCGCGGCC GGCGCGTTAC CTCGCGCTGG CGCTGCTGGC CGTGTGTTCG 
CTGGCCGCTG CCCGCGACCT CGATCAGGAC GAAGCCCTGA AGCTGCGGCA GAAGGGCATT
ATCCTGCCAC TCGAGCACTT GCTGGAAACC GCCTTGGGGC GTTACCCCGG GGCGCGTTTG
CTGGAGGCCG AGCTGGAAGA GGACGACGAT CGCTACGAAT ATGAAGTCGA GTTGCTGACG
ACTGAAGGTG TGGTGCGCGA GATCAAGCTC GATGCCAGCA CCGGCGCCCT GCTCAAAGAC
GAGGAAGACG ACTGA
 
Protein sequence
MIHLPRPARY LALALLAVCS LAAARDLDQD EALKLRQKGI ILPLEHLLET ALGRYPGARL 
LEAELEEDDD RYEYEVELLT TEGVVREIKL DASTGALLKD EEDD