Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1946 |
Symbol | |
ID | 5869735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2188682 |
End bp | 2188996 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641547072 |
Product | peptidase |
Protein accession | YP_001668185 |
Protein GI | 167032954 |
COG category | [S] Function unknown |
COG ID | [COG3212] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00953564 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCCACT TACCGCGGCC GGCGCGTTAC CTCGCGCTGG CGCTGCTGGC CGTGTGTTCG CTGGCCGCTG CCCGCGACCT CGATCAGGAC GAAGCCCTGA AGCTGCGGCA GAAGGGCATT ATCCTGCCAC TCGAGCACTT GCTGGAAACC GCCTTGGGGC GTTACCCCGG GGCGCGTTTG CTGGAGGCCG AGCTGGAAGA GGACGACGAT CGCTACGAAT ATGAAGTCGA GTTGCTGACG ACTGAAGGTG TGGTGCGCGA GATCAAGCTC GATGCCAGCA CCGGCGCCCT GCTCAAAGAC GAGGAAGACG ACTGA
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Protein sequence | MIHLPRPARY LALALLAVCS LAAARDLDQD EALKLRQKGI ILPLEHLLET ALGRYPGARL LEAELEEDDD RYEYEVELLT TEGVVREIKL DASTGALLKD EEDD
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