| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1940 |
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| Symbol | |
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| ID | 5869729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2182156 |
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| End bp | 2184714 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547066 |
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| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
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| Protein accession | YP_001668179 |
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| Protein GI | 167032948 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1049] Aconitase B |
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| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00122172 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCCCAGC CGCTGAACGC CGAACAAACT GCAGGCCTGG TCGAGCTGCT GAAAAACCCG
CCGGCCGGCG AAGAAGCCTT CCTCGTAGAC CTGATCACCA ACCGCGTACC GCCAGGGGTC
GACGAAGCTG CCTACGTCAA GGCCGCTTTC CTCTCCGCCG TCGCCAAGGG CGAAGCCAAG
TCGCCACTGA TCGACCGCAA GCACGCCACC GAACTGCTGG GCACCATGCA GGGCGGCTAC
AACATCGAAA CGCTGGTCGC ACTGCTGGAT GACGCCGAAC TGGGCGCCGT CGCGGCCGAG
CAGCTCAAGC ACACCCTGCT GATGTTCGAT GCCTTCCACG ACGTGGCCGA AAAAGCCAAG
GCCGGCAACG CGCATGCCAA GGCCGTGCTG GAATCCTGGG CTGCTGGCGA GTGGTTCACC
TCGCGTCCGG CCATCGCCGA CAAGTACACC CTGACCGTGT TCAAGGTACC TGGCGAAACC
AACACCGACG ACCTGTCCCC AGCCCCGGAC GCCTGGTCGC GCCCAGACAT CCCGCTGCAC
GCCCTGGCCA TGCTGAAAAT GGCCCGCGAC GGCATCGAAC CGTCGCAGCC TGGTTCGGTC
GGCCCGCTGG CCCAGATCGA AGCCGTCAAG GCCAAGGGTT TCCCGGTTGC CTATGTGGGT
GACGTGGTCG GTACCGGCTC CTCGCGTAAA TCCGCTACCA ACTCGGTACT GTGGTTCTTC
GGCGACGACA TCCCGTACGT GCCGAACAAA CGCGCCGGTG GCTTCTGCTT CGGCACCAAG
ATCGCTCCGA TCTTCTACAA CACCATGGAA GACGCCGGCG CCCTGCCGAT CGAATTCGAC
TGCACCAACC TGGGCATGGG CGACGTCATC GACGTTTACC CGTACAAAGG TGAAGTACGC
CGTCACGGCA GCGACGAACT GGTCACCAAC TTCGAGCTGA AAACCGAAGT GCTGCTGGAT
GAAGTCCGCG CTGGCGGCCG TATTCCGCTG ATCGTCGGCC GTGGCTTGAC CGAAAAAGCC
CGCGCCGAAC TGGGCCTGGG TGCTTCCGAC CTGTTCAAGA AACCAGAGCA GCCTGCCGAT
TCCGGCAAGG GCTTCACCCT GGCGCAGAAA ATGGTCGGCC GTGCCTGCGG CCTGCCAGAA
GGCCAGGGCG TGCGCCCAGG TGCCTACTGC GAGCCGAAGA TGACCACCGT CGGCTCCCAG
GACACCACGG GCCCGATGAC CCGCGACGAG CTGAAAGACC TGGCGTGCCT GGGCTTCTCC
GCTGACCTGG TGATGCAGTC GTTCTGCCAC ACCGCGGCCT ATCCAAAGCC GATCGACGTC
ACCACCCACC ACACCCTGCC AGACTTCATC CGCACCCGTG GCGGCGTGTC GCTGCGCCCA
GGCGACGGCA TCATCCACAG CTGGCTGAAC CGCATGCTGA TGCCTGACAC CGTGGGTACC
GGTGGCGACT CGCACACCCG CTTCCCGATC GGTATCTCGT TCCCGGCCGG TTCCGGCCTG
GTGGCTTTCG CCGCCGCCAC CGGCGTCATG CCGCTGGACA TGCCAGAGTC GATCCTGGTG
CGCTTCAAGG GCAAACTGCA GCCAGGCATC ACCCTGCGTG ACCTGGTGCA TGCCATCCCT
TACTACGCCA TCCAGAAGGG CCTGCTGACC GTCGAGAAGA AGGGCAAGAA AAACGCCTTC
TCCGGCCGCA TCCTGGAAAT CGAAGGCCTG GACGAACTGA CCGTCGAGCA AGCCTTCGAG
CTGTCCGACG CCTCGGCCGA GCGTTCCGCT GCCGGTTGCA CCATCAAGCT GCCAGAGAAG
GCCATCGCCG AGTACCTGAC CTCCAACATC ACCCTGCTGC GCTGGATGAT CGGTGAAGGC
TACGGCGATG CCCGCACCCT GGAGCGTCGC GCCCAGGCCA TGGAAGCCTG GCTGGCCAAG
CCTGAGCTGC TGTCGGCCGA CGCCGATGCC GAGTACGCCG AAATCATCGA AATCGACCTG
GCCGACGTCA AGGAGCCTGT GCTCTGCGCG CCGAACGACC CGGATGATGC CCGCCTGCTG
TCCTCGGTAC AGGGCGAGAA GATCGACGAA GTGTTCATCG GTTCGTGCAT GACCAACATC
GGTCACTTCC GCGCTGCCGG CAAGCTGCTG GACAAGGTCA AGGGTGGCAT CCCAACCCGT
CTGTGGCTGG CTCCGCCAAC CAAGATGGAC GCTCACCAGC TGACCGAAGA AGGCTACTAC
GGCATCTACG GCAAGGCCGG CGCACGCATG GAAATGCCAG GCTGCTCGCT GTGCATGGGT
AACCAGGCAC GTGTACAGAC CGGTTCGACC GTGGTTTCCA CCTCGACCCG TAACTTCCCG
AACCGTCTGG GCGACGCTAC CAACGTGTAC CTGGCATCGG CCGAGCTGGC TGCTGTTGCT
TCGATCATCG GCAAGCTGCC GACCGTCGAA GAGTACATGC AGTACGCGAA AGACATCGAC
AGCATGGCTG CCGACGTTTA CCGCTACCTG AGCTTCGACC AGATCGCCGA GTTCCGCGAA
GCGGCAGCCA ACGCCAAGAT CCCGGTGGTG CAGGCGTAA
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| Protein sequence | MPQPLNAEQT AGLVELLKNP PAGEEAFLVD LITNRVPPGV DEAAYVKAAF LSAVAKGEAK
SPLIDRKHAT ELLGTMQGGY NIETLVALLD DAELGAVAAE QLKHTLLMFD AFHDVAEKAK
AGNAHAKAVL ESWAAGEWFT SRPAIADKYT LTVFKVPGET NTDDLSPAPD AWSRPDIPLH
ALAMLKMARD GIEPSQPGSV GPLAQIEAVK AKGFPVAYVG DVVGTGSSRK SATNSVLWFF
GDDIPYVPNK RAGGFCFGTK IAPIFYNTME DAGALPIEFD CTNLGMGDVI DVYPYKGEVR
RHGSDELVTN FELKTEVLLD EVRAGGRIPL IVGRGLTEKA RAELGLGASD LFKKPEQPAD
SGKGFTLAQK MVGRACGLPE GQGVRPGAYC EPKMTTVGSQ DTTGPMTRDE LKDLACLGFS
ADLVMQSFCH TAAYPKPIDV TTHHTLPDFI RTRGGVSLRP GDGIIHSWLN RMLMPDTVGT
GGDSHTRFPI GISFPAGSGL VAFAAATGVM PLDMPESILV RFKGKLQPGI TLRDLVHAIP
YYAIQKGLLT VEKKGKKNAF SGRILEIEGL DELTVEQAFE LSDASAERSA AGCTIKLPEK
AIAEYLTSNI TLLRWMIGEG YGDARTLERR AQAMEAWLAK PELLSADADA EYAEIIEIDL
ADVKEPVLCA PNDPDDARLL SSVQGEKIDE VFIGSCMTNI GHFRAAGKLL DKVKGGIPTR
LWLAPPTKMD AHQLTEEGYY GIYGKAGARM EMPGCSLCMG NQARVQTGST VVSTSTRNFP
NRLGDATNVY LASAELAAVA SIIGKLPTVE EYMQYAKDID SMAADVYRYL SFDQIAEFRE
AAANAKIPVV QA
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