| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1938 |
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| Symbol | |
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| ID | 5869727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2179336 |
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| End bp | 2180526 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547064 |
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| Product | AcnD-accessory protein PrpF |
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| Protein accession | YP_001668177 |
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| Protein GI | 167032946 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000190692 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACATG TACCGCAAGT AAAAATCCCC GCCACCTACA TCCGCGGCGG CACCAGCAAA
GGCGTGTTCT TCCGCCTGCA AGACCTGCCC GAGCAGGCGC AAATCCCCGG CCCCGCCCGC
GATGCACTGC TGCTGCGGGT AATCGGCAGC CCCGACCCCT ACGGCAAGCA GATCGACGGC
ATGGGCGGTG CGACGTCCAG CACCAGCAAG ACCGTGATCC TGTCGCGAAG CATCAAGCCC
GAGCACGATG TCGATTACCT GTTCGGCCAA GTCAGCATCG ACAAGGCCTT CGTCGACTGG
AGCGGCAATT GCGGCAACCT GTCCGCTGCG GTCGGTTCGT TCGCCATCAG CAGCGGCCTG
GTCGACCCGG CGCGCATACC GCGCAACGGT ATCGCCACCG TGCGCATCTG GCAGGCGAAC
ATCGGCAAGA CCATCATCGC CCATGTGCCG GTCACCGAAG GCGAGGTGCA GGAAACCGGC
GATTTCGAGC TGGACGGGGT GACCTTCCCG GCGGCCGAGG TGCAGCTGGA GTTTCTTGAC
CCGGCCGCCG ACGAGGACGG CGACGGGGGT GCCATGTTCC CTACCGGCAA GCTGGTCGAT
GACCTGGAAG TGCCGGGTGT GGGCACCTTC AAGGCGACCT TGATCAATGC CGGCATCCCG
ACCATTTTTG TCAATGCTGC CGATATCGGC TACACCGGTA CCGAACTGCA GGACGCTATC
AATGGCGACC CGCAGGCACT GCTGCGTTTT GAGACCATTC GCGCCTATGG CGCCTTGCGC
ATGGGCCTGA TCGACAATGT CGACCAGGCT GCCGGGCGTC AGCACACACC AAAAGTGGCG
TTCGTTGCGC CACCGAGCAC CTACACTGCG TCCAGTGGCA AGCCGGTGCA GGCAGGCGAT
ATCGACCTGC TGGTACGGGC CCTGTCGATG GGCAAGCTGC ACCATGCCAT GATGGGTACG
GCGGCGGTGG CAATCGGCAC CGCAGCGGCC ATTCCGGGCA CGCTGGTCAA CCTCGCCGCT
GGCGGGGGCG AGCGCAGCGC CGTGCGTTTC GGTCATCCCT CGGGCACCCT GCGGGTCGGC
GCCGAGGCGC GTCAGGAGAA GGGTGAGTGG ACGGTGACCA AGGCAATCAT GAGCCGCAGT
GCTCGCGTGC TGATGGAGGG CTGGGTTCGC GTGCCTGGCG ACAGCTTCTA A
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| Protein sequence | MAHVPQVKIP ATYIRGGTSK GVFFRLQDLP EQAQIPGPAR DALLLRVIGS PDPYGKQIDG
MGGATSSTSK TVILSRSIKP EHDVDYLFGQ VSIDKAFVDW SGNCGNLSAA VGSFAISSGL
VDPARIPRNG IATVRIWQAN IGKTIIAHVP VTEGEVQETG DFELDGVTFP AAEVQLEFLD
PAADEDGDGG AMFPTGKLVD DLEVPGVGTF KATLINAGIP TIFVNAADIG YTGTELQDAI
NGDPQALLRF ETIRAYGALR MGLIDNVDQA AGRQHTPKVA FVAPPSTYTA SSGKPVQAGD
IDLLVRALSM GKLHHAMMGT AAVAIGTAAA IPGTLVNLAA GGGERSAVRF GHPSGTLRVG
AEARQEKGEW TVTKAIMSRS ARVLMEGWVR VPGDSF
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