| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1937 |
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| Symbol | |
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| ID | 5869726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2176683 |
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| End bp | 2179271 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547063 |
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| Product | aconitate hydratase |
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| Protein accession | YP_001668176 |
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| Protein GI | 167032945 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0000188613 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACACAG CATTCCGCAA GCACCTGCCA GGCACCGACC TGGACTACTT CGATGCCCGT
GCGGCGGTCG AGGCGATCAA GCCCGGCGCC TACGACGGCC TGCCATACAC CTCCCGCGTG
CTCGCCGAAA ACCTGGTGCG TCGCTGCGAC CCGGCCACGC TCGACGCCTC GCTGAGCCAG
CTGATCGAGC GCAAGCGCGA CCTCGACTTC CCGTGGTTCC CGGCCCGGGT GGTGTGCCAC
GACATTCTCG GCCAAACCGC GCTGGTCGAT CTCGCCGGCC TGCGTGATGC CATCGCCGAT
AAAGGTGGTG ACCCGGCTGC CGTCAACCCG GTGGTGCCGG TGCAACTGAT CGTCGACCAC
TCGCTGGCCG TGGAGTGCGG TGGTTTCGAC CCGCAGGCTT TCGAGAAGAA CCGCGCCATC
GAAGACCGCC GCAACGAAGA CCGCTTCCAC TTCATCAACT GGACCAAGAA GGCGTTCAAG
AACGTCGACG TGATCCAGCC GGGCAACGGC ATCATGCACC AGATCAATCT GGAGAAGATG
TCGCCGGTGA TCCATAACGA CCGTGGCGTG GCCTATCCGG ACACCTGCGT CGGCACCGAC
AGCCACACCC CGCATGTCGA TGCCCTGGGC GTGATCGCCA TCGGCGTGGG CGGCCTGGAG
GCCGAGAACG TGATGCTCGG GCGCGCCTCC TGGATGCGCC TGCCGGAAAT CGTCGGTGTC
GAGCTGACCG GCAAGCTGGC GCCGAACATC ACCGCCACCG ACCTGGTGCT GGCTCTGACC
GAGTTCCTGC GCAAGCAGAA GGTGGTCGGC GCATATCTGG AGTTTCACGG TGAGGGTGCC
CGCGCCCTGA CCCTGGGCGA TCGCGCCACC ATTTCCAACA TGGCCCCGGA ATACGGCGCC
ACTGCAGCGA TGTTCGCCAT CGACCAGCAG ACCATCGACT ACCTGCGCCT GACCGGCCGT
GAAGAGCAGC AGGTCAAGCT GGTGGAGACC TACGCCAAGG CCGCCGGCCT GTGGGCCGAC
AGCCTGGGCG CTGCCGTTTA TGAGCGTACC CTGAGCTTCG ACCTGTCGAG CGTGGTGCGC
AACATGGCCG GCCCGTCCAA CCCGCATGCT CGCGTGGCCA CCAGCGACCT GGCGGCCAAA
GGCATCGCCG GCAGTTGGGA AGAGGTACCG GGGCAAATGC CTGATGGCGC GGTGATCATC
GCCGCCATCA CCAGTTGCAC CAACACCAGT AACCCGCGCA ACGTGATTGC CGCAGGCTTG
ATTGCACGCA ATGCCAACCG GCTGGGGCTG GCCCGCAAGC CGTGGGTCAA GTCATCGCTG
GCGCCAGGCT CCAAGGCCGT GCAGTTGTAT CTGGAAGAGG CCGGCCTGGA GAAGGAACTG
GAGCAACTCG GCTTTGGCAT CGTCGCCTTC GCCTGCACCA CTTGCAACGG TATGTCCGGC
GCCCTCGACC CGGTGATCCA GCAAGAGATC ATCGACCGCG ACCTGTACGC CACCGCCGTG
CTGTCGGGTA ACCGCAACTT CGACGGGCGT ATCCATCCGT ATGCCAAACA GGCTTTCCTG
GCTTCACCGC CGCTGGTGGT GGCCTACGCC ATCGCCGGTA CCATCCGCTT CGACATCGAG
AAGGATGTGC TGGGTGTGGT CGATGGCAAG GAAATCCGCC TGAAGGATAT CTGGCCCAGC
GATGAAGAAA TCGATGCCGT GGTGCGTGCC GCGGTCAAGC CGGAGCAGTT CCGCAAGGTG
TATATCCCGA TGTTCGCCAT CGAGGAGGAC CGTGGGCCGA AAGTGGCGCC GCTGTACGAC
TGGCGCCCGA TGAGTACCTA CATCCGCCGC CCACCCTACT GGGAAGGCGC CCTGGCGGGC
GAGCGCACGT TGCGTGGCAT GCGCCCGCTG GCGGTGCTGC CGGACAACAT CACCACCGAC
CACCTGTCGC CATCGAACGC CATCATGCTC GACAGCGCCG CCGGTGAGTA CCTGGCAAAA
ATGGGCCTGC CGGAAGAGGA CTTCAACTCC TACGCTACCC ACCGTGGCGA CCACCTCACC
GCCCAGCGCG CCACCTTTGC CAACCCCAAG CTGTTCAACG AAATGGTGCG CAAGGAAGAT
GGCAGCGTGA AGCAGGGCTC GCTGGCGCGT ATCGAGCCGG AAGGCAAGGT CACCCGCATG
TGGGAGGCGA TCGAAACCTA CATGCAGCGC AAGCAGCCGC TGATCATCGT TGCCGGTGCG
GACTACGGCC AGGGCTCGTC CCGTGACTGG GCGGCCAAGG GTGTGCGCCT GGCGGGTGTC
GAGGCAATCG TCGCCGAAGG CTTCGAGCGT ATTCACCGCA CCAACCTGGT GGGTATGGGT
GTATTGCCGT TGGAGTTCAA ACCCGGCACC GACCGCAAGA CCTTGGGCCT GGACGGCAGC
GAGACCTACG ATGTGCTCGG TGCGCGCACG CCGCGGGCAA CGCTGACGCT GGTGGTCACT
CGGGCCAATG GCGAGCGGCT GGAAGTGCCG GTCACTTGCC GCCTGGACAC TGCCGAGGAA
GTGTCGATCT ACGAAGCGGG TGGTGTGCTG CAGCGCTTTG CCCAGGACTT CCTCGAAGCG
ACCGCCTGA
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| Protein sequence | MNTAFRKHLP GTDLDYFDAR AAVEAIKPGA YDGLPYTSRV LAENLVRRCD PATLDASLSQ
LIERKRDLDF PWFPARVVCH DILGQTALVD LAGLRDAIAD KGGDPAAVNP VVPVQLIVDH
SLAVECGGFD PQAFEKNRAI EDRRNEDRFH FINWTKKAFK NVDVIQPGNG IMHQINLEKM
SPVIHNDRGV AYPDTCVGTD SHTPHVDALG VIAIGVGGLE AENVMLGRAS WMRLPEIVGV
ELTGKLAPNI TATDLVLALT EFLRKQKVVG AYLEFHGEGA RALTLGDRAT ISNMAPEYGA
TAAMFAIDQQ TIDYLRLTGR EEQQVKLVET YAKAAGLWAD SLGAAVYERT LSFDLSSVVR
NMAGPSNPHA RVATSDLAAK GIAGSWEEVP GQMPDGAVII AAITSCTNTS NPRNVIAAGL
IARNANRLGL ARKPWVKSSL APGSKAVQLY LEEAGLEKEL EQLGFGIVAF ACTTCNGMSG
ALDPVIQQEI IDRDLYATAV LSGNRNFDGR IHPYAKQAFL ASPPLVVAYA IAGTIRFDIE
KDVLGVVDGK EIRLKDIWPS DEEIDAVVRA AVKPEQFRKV YIPMFAIEED RGPKVAPLYD
WRPMSTYIRR PPYWEGALAG ERTLRGMRPL AVLPDNITTD HLSPSNAIML DSAAGEYLAK
MGLPEEDFNS YATHRGDHLT AQRATFANPK LFNEMVRKED GSVKQGSLAR IEPEGKVTRM
WEAIETYMQR KQPLIIVAGA DYGQGSSRDW AAKGVRLAGV EAIVAEGFER IHRTNLVGMG
VLPLEFKPGT DRKTLGLDGS ETYDVLGART PRATLTLVVT RANGERLEVP VTCRLDTAEE
VSIYEAGGVL QRFAQDFLEA TA
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