Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1933 |
Symbol | |
ID | 5869722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2172879 |
End bp | 2173415 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641547059 |
Product | hypothetical protein |
Protein accession | YP_001668172 |
Protein GI | 167032941 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4067] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.160249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00000000262846 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGACTTA CACCCGTTTT ATTGCTGCTA TGCCTCACCC TGCTGCCGGC CCTTGGCCAG GCTGCGGGCA AGACCGTGTA TGGTCTCAAC GAATACGCAC AGCTGGGCGA CCTGAACCTG GAAGTGGCCG CCAAGCTCGA CACCGGTGCC AAGACCGCGT CGCTCAGCGC CCGCGACATC AAGCGGTTCA AGCGCAACGG CGAAAGCTGG GTACGCTTCT ACCTCGCCAT CGATGCGGCC CATTCGCACC CGATCGAGCG CCCACTGGCA CGCGTAAGCA AGATCAAGCG CCGGGCTGGC GACTATGATG CCGAATCGGG CAAGGCCTAC ACGGCCCGCC CGGTCATCGA ACTCGAAATC TGCATGGGCC AGGCCATGCG CACCATCGAA GTGAACCTCA CCGACCGCAG CGCCTTCCAG TTCCCGCTGC TGATCGGCTC CGAGGCGCTC AAGCACTTCG ACGCGCTGGT TGACCCAAGC CTTAAATATG CGGCCGGCAA ACCTGCCTGT GCCACCGACG CTCCCAAAGC AGAGTAA
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Protein sequence | MRLTPVLLLL CLTLLPALGQ AAGKTVYGLN EYAQLGDLNL EVAAKLDTGA KTASLSARDI KRFKRNGESW VRFYLAIDAA HSHPIERPLA RVSKIKRRAG DYDAESGKAY TARPVIELEI CMGQAMRTIE VNLTDRSAFQ FPLLIGSEAL KHFDALVDPS LKYAAGKPAC ATDAPKAE
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