Gene PputGB1_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1933 
Symbol 
ID5869722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2172879 
End bp2173415 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content62% 
IMG OID641547059 
Producthypothetical protein 
Protein accessionYP_001668172 
Protein GI167032941 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.160249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000262846 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGACTTA CACCCGTTTT ATTGCTGCTA TGCCTCACCC TGCTGCCGGC CCTTGGCCAG 
GCTGCGGGCA AGACCGTGTA TGGTCTCAAC GAATACGCAC AGCTGGGCGA CCTGAACCTG
GAAGTGGCCG CCAAGCTCGA CACCGGTGCC AAGACCGCGT CGCTCAGCGC CCGCGACATC
AAGCGGTTCA AGCGCAACGG CGAAAGCTGG GTACGCTTCT ACCTCGCCAT CGATGCGGCC
CATTCGCACC CGATCGAGCG CCCACTGGCA CGCGTAAGCA AGATCAAGCG CCGGGCTGGC
GACTATGATG CCGAATCGGG CAAGGCCTAC ACGGCCCGCC CGGTCATCGA ACTCGAAATC
TGCATGGGCC AGGCCATGCG CACCATCGAA GTGAACCTCA CCGACCGCAG CGCCTTCCAG
TTCCCGCTGC TGATCGGCTC CGAGGCGCTC AAGCACTTCG ACGCGCTGGT TGACCCAAGC
CTTAAATATG CGGCCGGCAA ACCTGCCTGT GCCACCGACG CTCCCAAAGC AGAGTAA
 
Protein sequence
MRLTPVLLLL CLTLLPALGQ AAGKTVYGLN EYAQLGDLNL EVAAKLDTGA KTASLSARDI 
KRFKRNGESW VRFYLAIDAA HSHPIERPLA RVSKIKRRAG DYDAESGKAY TARPVIELEI
CMGQAMRTIE VNLTDRSAFQ FPLLIGSEAL KHFDALVDPS LKYAAGKPAC ATDAPKAE