Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1922 |
Symbol | |
ID | 5869711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2161805 |
End bp | 2162782 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641547048 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_001668161 |
Protein GI | 167032930 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000395353 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 2.80385e-16 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTTGCCGC GCTTTCCTGC CGTCACCCGT AGCCTGTCCC TGGCCGCCCT GCTGGTAGCG GGCCCCGCTG CTGCGCTGGA GCTGCCACTG CCACCGCCCG GTGAAGACAT CGTCGGCCAG GTGCATGTGA TCAAGGCAAA GTACGAGGAC ACGTTCGCCG ATATCGGCAC CGCCAACGAC CTCGGCTACC TGGAAATGAT TGCCGCCAAC CCGGGCGTCG ACCCCTGGCT GCCGGGCGCC GGCACCGAAA TCATCCTGCC GACCCGTTAC GTCTTGCCGC CGGGCCCGCG TGAAGGCATC GTCATCAACC TGGCCGAGTA CCGCCTGTAT TACTTCCCGA AAGGGCAGAA CGTGGTACAT ACCTTCCCGC TGGGTATTGG CCGGGAGGGT TGGGGTTCGC CGATCGCCAA CACCAAGATC ACTGCCAAGA CGCCAAACCC GACCTGGACG CCGCCTGCCT CGATTCGCAA AGAGCACGCA GCGGACGGTG ACATCCTGCC CGCCGTGGTG CCGGCTGGCC CGGACAACCC GCTGGGGCCG TTCAAGTTCA CCTTGGGTGT GCCGGGCTAC CTGATCCACG GTTCGAACAA GAAGTTCGGC ATTGGTATGC GTACCAGCCA CGGTTGCTTC CGCATGCTCA ACAACAACGT GCTGGAACTG TCGAAGATGG TGCCGGTGGG TACTCCGGTA CGCATCATCA ACGAGCCGTA CAAGTTTGGT ATCAGTGGCG GCAAGGTCTA TCTTGAGGCA CACACGCCGC TGGATGACCA GGGTAACCCG TCAGTGGTGG ACAAACACAC CGCCGTTATC AATGCCTTGC TCAAGCGCGA AGACCTGGCC AATAACCTGC GCATGAACTG GGACATGGTG CGAGACGTGG TGGCTGCAGA AGATGGCATG CCGGTAGAAA TTGCCGTGCC CGTGGAAAAC CAGGGTGGCA CACCAATGGT TACGAGCATT CCGCCCGAAC TGCAGTAA
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Protein sequence | MLPRFPAVTR SLSLAALLVA GPAAALELPL PPPGEDIVGQ VHVIKAKYED TFADIGTAND LGYLEMIAAN PGVDPWLPGA GTEIILPTRY VLPPGPREGI VINLAEYRLY YFPKGQNVVH TFPLGIGREG WGSPIANTKI TAKTPNPTWT PPASIRKEHA ADGDILPAVV PAGPDNPLGP FKFTLGVPGY LIHGSNKKFG IGMRTSHGCF RMLNNNVLEL SKMVPVGTPV RIINEPYKFG ISGGKVYLEA HTPLDDQGNP SVVDKHTAVI NALLKREDLA NNLRMNWDMV RDVVAAEDGM PVEIAVPVEN QGGTPMVTSI PPELQ
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