| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1917 |
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| Symbol | greB |
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| ID | 5869706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2157018 |
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| End bp | 2157488 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641547043 |
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| Product | transcription elongation factor GreB |
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| Protein accession | YP_001668156 |
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| Protein GI | 167032925 |
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| COG category | [K] Transcription |
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| COG ID | [COG0782] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0107696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000000000204749 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGAGCACCA ACATCATCAC CACGGAAGGC CATGAGGCGC TGAAGAAGGA GCTGGACCAC
CTGTGGCGGG TGTATCGGCC GGAAATCACC CAGAAAGTCG CCTGGGCGGC GTCGCTGGGA
GACCGTAGCG AGAACGCCGA CTATCAGTAC AACAAGAAGC TACTGCGCGA AATCGACCGC
CGAGTGCGTT ACCTGCGCAA GCGCCTTGAA GATGTGAAGG TGGTGGCGTA CTCGCCGCAG
CAGGAGGGCA AAGTGTTTTT CGGTGCCTGG GTCGAAATCG AGAACGATGA GGGCGAGACC
ATGAAGTTTC GCATTGTCGG CTATGACGAG ATCTACGGGC GCAACGATTA CATTTCGATC
GACTCGCCCA TGGCCCGTGC CTTGTTGAAG AAGGAGGAGG GCGATGAGGT GGTGGTGCAT
ACACCTACTG GTGAAGCGAC CTGGTATGTG AACAGCATCA GCTACGGGTG A
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| Protein sequence | MSTNIITTEG HEALKKELDH LWRVYRPEIT QKVAWAASLG DRSENADYQY NKKLLREIDR
RVRYLRKRLE DVKVVAYSPQ QEGKVFFGAW VEIENDEGET MKFRIVGYDE IYGRNDYISI
DSPMARALLK KEEGDEVVVH TPTGEATWYV NSISYG
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