| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1914 |
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| Symbol | |
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| ID | 5869703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2154516 |
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| End bp | 2155922 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547040 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001668153 |
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| Protein GI | 167032922 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.260626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000000157074 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCGAT GCTGGCTTGT TTTCCTGCTG ACGCTTGGGC TGGTCCTTGC CGGTCCGGCA
CAGGCGCGCG CGCCGGGGCC GCAGCAGAAT ATTCCGCCAG CCAAGGTGCG TGACCTGCAG
CAGATTCGCA CCAGCAAAGT GCTGCGGGTG CTGGTCAACC AAAGCCGCAA CAGCTCGGGT
GAAGTCAAGG GCGAGCCGGT CGGCATTGAG TATTATCGCC TGCGTGCCCT GGAGCATTAC
CTCAATGCTC GTACCGACGA CGACCAGCAG ATCCAGCTGA AACTCATCCC AAGGGCCAAG
GAGCAGTTGC TGGGCGCCTT GGCCCGTGGC GAGGGTGACC TGGCTGCGCC TGGCGAACTG
CTCGACCCCA GCACGGTGCG CGGCGTCAGC AGCAGTGCGC CGATACTCGA CCAGGTGCCG
TTGATGCTGG TCGGGCGTAA AGGCGAGCGA AGCTTCAGCA AGGTCGAGCA GTTGTCCGGG
CGTACCGTGG CCTTGACCAG CGCCAGCGCC GCCGGGCCAA TGATCCAGCA GGTCAACCAG
CAACTGGCGC TGCGCAAGCG GCCGCCAATC AAGGTGGAGT GGGTCGATTC GACGCTGGCG
GTGGAGGACG TGCTGGAGAT GGTACAGGCT GGCATCTACC ACCTGACCGT AGTCGAGCAG
CCTATTGCCC GCCGATGGGC GCGGGTTATG CCGCGGCTGC GCCTGGACAG CCGGGTGCAC
CTGGGGGCGC CGCAAGCCAT GCGCTGGTAT GTGGGGCGTG ATGCGCCGCA ATTGTTGGCG
ACAGTCGATC ACTTCCTGCA AGGTTACCGC GCGCCTGACA ACCAGGATGC CGCGTTCGAG
CGCATCTACC GCCGTCAGTA TCGGGTGCAC AACCCGTTGG CCAGCAAGGA CCGCCAGCGC
CTGGCCTCGG TGCGGGCGGT GCTGCAGAAG CATGGTCAGG CGCAGCAGAT CGACTGGCTC
AACCTGGCTG CGCTGGCCTT CAAGGAGTCG ACGCTCAACC CGGCTGCACG CGGCACCGGT
GGTGCCCATG GCCTGATGCA GATCACCCCT TCGGCCGCCC AGCGCGTGGG GGTGAGCAAC
ACCGCGACGG TGGATGGCAA TGTCCAGGCC AGTGCTCGAT ACCTGGCGCT TATCCGGCGC
AAGTTCTTCG CCAGTGCCAA GATCAACGAG CGTGAGCGCA TGGCCTTTGT GCTGGCAGCC
TACAATCTTG GCCCCGAGCG GGTCCAGGCC ATGCGCGCCG AGGCTCGGCG GCGTGGGCTC
AACGGTAACC AGTGGTTTTT CCAGACCGAA CGCATCGCCA TGGAGCAGGT GGGTATGGGG
CCAGTCAATT TCGTCAACAG CGTCAACAAA TACTACCTGG CGTTCAACCG CGAACGGGTC
GCGCTGGAGC GCGTAGCGAA GCGTTGA
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| Protein sequence | MLRCWLVFLL TLGLVLAGPA QARAPGPQQN IPPAKVRDLQ QIRTSKVLRV LVNQSRNSSG
EVKGEPVGIE YYRLRALEHY LNARTDDDQQ IQLKLIPRAK EQLLGALARG EGDLAAPGEL
LDPSTVRGVS SSAPILDQVP LMLVGRKGER SFSKVEQLSG RTVALTSASA AGPMIQQVNQ
QLALRKRPPI KVEWVDSTLA VEDVLEMVQA GIYHLTVVEQ PIARRWARVM PRLRLDSRVH
LGAPQAMRWY VGRDAPQLLA TVDHFLQGYR APDNQDAAFE RIYRRQYRVH NPLASKDRQR
LASVRAVLQK HGQAQQIDWL NLAALAFKES TLNPAARGTG GAHGLMQITP SAAQRVGVSN
TATVDGNVQA SARYLALIRR KFFASAKINE RERMAFVLAA YNLGPERVQA MRAEARRRGL
NGNQWFFQTE RIAMEQVGMG PVNFVNSVNK YYLAFNRERV ALERVAKR
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