| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1913 |
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| Symbol | |
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| ID | 5869702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2153564 |
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| End bp | 2154358 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547039 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001668152 |
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| Protein GI | 167032921 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.701497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000000200441 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACTGA TCGATATCGG CGTCAACCTG ACCAACAGCA GTTTCCACGA CCAACAGGCA
GCAATCGTCG AGCGCGCACT TGAGGCCGGG GTTACGCAAA TGGTGCTGAC AGGCACTAGC
CTGGCCGTCA GCGAACAGGC GTTGGCGCTG TGCCAGCAGC TGGACCCGAA CAGTGCGCAC
CTGTTCGCCA CGGCCGGCGT GCACCCTCAT GACGCCAAAG CCTGGGATGC CGACAGCGAG
CGCCAGCTGC GCCTGTTGCT GAATGAACCG CGCGTGCGCG CCGTGGGCGA ATGCGGCCTG
GATTTCAACC GCGACTTCTC CCCTCGCCCG CTGCAGGAAA AAGCCCTGGA AGCCCAGCTG
GCCCTGGCTG TGGAGCTGCG CCTGCCGGTG TTCCTGCACG AGCGTGATGC CAGCGAACGC
TTGCTGGCAA TCCTCAAGGA TTACCGCGAC CACTTGACCG GCGCGGTGGT GCACTGCTTT
ACCGGTGAGC GCGAAGCACT GTTCGCCTAT CTGGACATGG ACTTGCATAT CGGCATTACG
GGCTGGATTT GCGACGAACG CCGCGGCACC CACCTGCACC CTCTGGTAGG CAACATTGCG
CAAGGCCGGC TGATGCTGGA AAGCGACGCG CCCTACCTGC TGCCGCGTAG CCTGCGGCCC
AAGCCAAAAA ACGGCCGTAA CGAGCCGGCG TTTCTGCCGG AGGTCTTGCG CGAAGTGGCC
CTGCATCGAG GTGAGTCGGC CGAGCAGACC GCGGCGCATA CCACAGCGAC GGCGCGGGCA
TTTTTCCAAA TCTGA
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| Protein sequence | MQLIDIGVNL TNSSFHDQQA AIVERALEAG VTQMVLTGTS LAVSEQALAL CQQLDPNSAH
LFATAGVHPH DAKAWDADSE RQLRLLLNEP RVRAVGECGL DFNRDFSPRP LQEKALEAQL
ALAVELRLPV FLHERDASER LLAILKDYRD HLTGAVVHCF TGEREALFAY LDMDLHIGIT
GWICDERRGT HLHPLVGNIA QGRLMLESDA PYLLPRSLRP KPKNGRNEPA FLPEVLREVA
LHRGESAEQT AAHTTATARA FFQI
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