Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1905 |
Symbol | |
ID | 5869694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2145936 |
End bp | 2146208 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641547031 |
Product | histone family protein DNA-binding protein |
Protein accession | YP_001668144 |
Protein GI | 167032913 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.173408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000216257 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAACAAGT CGGAACTGAT TGACGCTATC GCCGCATCTG CAGACATCCC GAAAGCTGTA GCCGGCCGTG CGCTGGATGC AGTCATCGAA TCCGTCACCG GCGCCCTGAA GCAAGGTGAC GATGTAGTAC TGGTTGGCTT CGGTACCTTC TCGGTCAAGG ATCGCGCCGA GCGTACCGGC CGCAACCCGC AAACCGGCAA GGCGATCAAG ATCGAAGCCG CCAAGGTTCC AGGTTTCAAG GCAGGCAAAG GCCTGAAAGA CGCCGTCAAC TAA
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Protein sequence | MNKSELIDAI AASADIPKAV AGRALDAVIE SVTGALKQGD DVVLVGFGTF SVKDRAERTG RNPQTGKAIK IEAAKVPGFK AGKGLKDAVN
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