| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1902 |
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| Symbol | clpP |
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| ID | 5869691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2141189 |
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| End bp | 2141830 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641547028 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001668141 |
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| Protein GI | 167032910 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00658195 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCCGCA ATTCTTATAT TCAGCAGAGC TCTGACATCC AGGCCGCAGG CGGTCTGGTC
CCGATGGTTA TCGAGCAGTC CGCCCGTGGC GAACGCGCCT ACGACATCTA CTCGCGCCTG
TTGAAGGAGC GAGTGATCTT CCTGGTGGGC CCTGTAGAAG ACTACATGGC CAACCTGGTA
GTGGCGCAGA TGCTGTTCCT TGAGGCGGAA AACCCGGACA AGGATATCCA TCTTTACATC
AACTCCCCAG GCGGTTCGGT GACGGCTGGC ATGTCGATCT ACGACACCAT GCAGTTCATC
AAGCCGGATG TCTCGACCAT CTGCATCGGC CAAGCCTGCA GCATGGGTGC CTTCCTGTTG
ACCGCTGGCG CCAAGGGCAA GCGTCACTGC CTGCCTAACT CGCGGGTGAT GATTCACCAG
CCGCTGGGCG GCTTCCAGGG CCAGGCTACC GACATCCAGA TCCACGCCCA GGAAATCCTC
AGCATCAAGG CGCGTCTCAA CGAGCTGCTG GCCTACCACA CCGGCCAGGA CCTCGAGACC
ATTCAGCGCG ATACTGAGCG TGACAACTTC ATGAGCGCCT CGCGCGCGGC CGAGTACGGC
CTGATCGACT CGGTCTACGA CAAGCGGCAA CTGGCCTCCT GA
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| Protein sequence | MSRNSYIQQS SDIQAAGGLV PMVIEQSARG ERAYDIYSRL LKERVIFLVG PVEDYMANLV
VAQMLFLEAE NPDKDIHLYI NSPGGSVTAG MSIYDTMQFI KPDVSTICIG QACSMGAFLL
TAGAKGKRHC LPNSRVMIHQ PLGGFQGQAT DIQIHAQEIL SIKARLNELL AYHTGQDLET
IQRDTERDNF MSASRAAEYG LIDSVYDKRQ LAS
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