| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1892 |
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| Symbol | |
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| ID | 5869677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2129425 |
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| End bp | 2131173 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547014 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001668131 |
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| Protein GI | 167032900 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAT CCGCGTCGAC CCACACCCAA CTGATCCAGG CGTCCTGGGC CCGCTGCCGC
GATCACGGCC TGCAACCACA GCACGCACCG GACTTCGACT GCCTGACCCG TACCGAGCTA
AGCGCCCTGC TGGAGCGGCG CCAGGCGCTG CTACGCCTGA CCCGCGAGGA AGTGCTGCCG
CAATACGCGC ACCTGCTGGG CAATGCCAGC TACCTGGTGA TGCTGGCCGA TGCCGGTGGC
TGCCTGCTCG ACAGCTGGGG CTCGCGACGC TTCATCGAAC CGCACCAACA GCACGGCTTC
AGCGCAGGCG CCCATTGGCA CGAGCGTGGC GTGGGCACCA ATGCCCTGGG CACCGCACTG
ATTTGCGCCG AGGCGATTCA CGTCGGCCAG GACGAGCACT TCCTGCGGCA GAACCGCTAC
ATGTCCAGCG CCGCCGCCCC CCTGTTCGAC GCCGCACGAC AACTGGTCGG GGTGCTCGAC
GTAGCGAGCG ACGGCTACTT GCCGGCCAGC CAGACGCTTG GCTTGGTGCG CATGATGGGC
CAAAGCCTGG AAAACCGCCT GATCCTCGCC GAACATGCCG ACCAGCATGC ACAGCTGATC
TTCAACAGCG CCTCTGACAA CCTCGACAGC CCCTGGGCCG GCCTGCTGGT ATTCGATGAG
CGCGGGCAGG TCATGGCTGC CAATCACCGG GCCGACAGCC TGCTCGGCGG CAACCCGCTG
CAACAGAACA TCGAGCAACT GTTCCAGTTG CCCCTGCAGC AGCTGCTCAG CCATCCCCAG
CAACAGCCCT TCGCCCTGCA GGCCACGGGG CGCAACCGCT TCCATTGCCA GTGGCACCCT
GCGCGCGAAG CCACACGCCG CCGCGAGGCT GGCAGTGGCG AGGCGCGCCT GGATAAAGCG
TTGCAACAGG CCGGCCTGTT GCTGGAAAAG GACATCCCGG TGTTGGTGCA GGGTGAAACC
GGCGTAGGCA AGGAAGTGTT CGTCGAAACC TTGCACCGGG CCAGCAGCCG CGCCAATCAG
CCGCTGATTG CCGTCAACTG TGCGGCGATC CCAGCCGAAC TGGTGGAGTC GGAACTGTTT
GGCTACGACA AAGGCGCGTT CACCGGCGCC CACCACAAGG GCAACCTGGG GCTGATCCGC
AAAGCCGACC ACGGCATCCT GTTTCTCGAC GAAATAGGCG ACATGCCACT GCCCACTCAA
GCCCGCCTGC TGCGTGTGCT GCAGTCACGC ACTATCCAGC CACTGGGTAG CGGCGAGCCG
GTAGCGGTAG ATATCCGCGT GGTGTCGGCG AGCAACCGCG ACCTGGCCGA AGAAGTGCGC
GCCGGGCGCT TTCGCCAGGA CCTGTACTAC CGCATCGCCG GGCTGGCCGT GGTATTGCCT
GCGCTGCGCG AGCGCAGTGA CCGGCGTCAG TTGATTGAGC AGCTACATGC CCGCTACCGC
GACCCCGGGC AACCTGCGCG GCTGCCCCCG GCCATTATCG ACCTGCTCGA TCGACACCCA
TGGCCAGGCA ACCTGCGCGA GCTGGTGAGC GTGCTGCAGG TGGCACTGGC GCTGGCGGGC
AACGGACCGG TCGGCATCGA GCACCTGCCT GCGGGCTTTC TGGCCGAGTC GCAGCTACCG
GTACGGGTGA CGACCGAAGA GACGGACCTG CAGACCCTGG TCGAGCAAGC CAATGGCAAC
CTGTCGGCGG TGGCGCGGGG GCTGGGTATC AGCCGCACTA CGCTGTACAA GCGTTTGCGG
GCGCACTGA
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| Protein sequence | MAASASTHTQ LIQASWARCR DHGLQPQHAP DFDCLTRTEL SALLERRQAL LRLTREEVLP
QYAHLLGNAS YLVMLADAGG CLLDSWGSRR FIEPHQQHGF SAGAHWHERG VGTNALGTAL
ICAEAIHVGQ DEHFLRQNRY MSSAAAPLFD AARQLVGVLD VASDGYLPAS QTLGLVRMMG
QSLENRLILA EHADQHAQLI FNSASDNLDS PWAGLLVFDE RGQVMAANHR ADSLLGGNPL
QQNIEQLFQL PLQQLLSHPQ QQPFALQATG RNRFHCQWHP AREATRRREA GSGEARLDKA
LQQAGLLLEK DIPVLVQGET GVGKEVFVET LHRASSRANQ PLIAVNCAAI PAELVESELF
GYDKGAFTGA HHKGNLGLIR KADHGILFLD EIGDMPLPTQ ARLLRVLQSR TIQPLGSGEP
VAVDIRVVSA SNRDLAEEVR AGRFRQDLYY RIAGLAVVLP ALRERSDRRQ LIEQLHARYR
DPGQPARLPP AIIDLLDRHP WPGNLRELVS VLQVALALAG NGPVGIEHLP AGFLAESQLP
VRVTTEETDL QTLVEQANGN LSAVARGLGI SRTTLYKRLR AH
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