Gene PputGB1_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1884 
Symbol 
ID5869669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2120815 
End bp2121483 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content67% 
IMG OID641547006 
ProductGntR family transcriptional regulator 
Protein accessionYP_001668123 
Protein GI167032892 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.372242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG CCCACCACTT GCCTGCCCTG CTCGCGGCCG GTGAAACCCG CCTGTCGGCC 
GAGCAGATAT ACCCGCGCCT GTTCGATGCC ATTCTGGAAC AGCGCCTGCC ACCCGGCAGC
CTGCTGCCCG AGGAGGCCCT GGGCCATGCC TTTGGTGTCA GCCGCACGGT GATCCGCCGC
GTGCTCGGGC GCCTGTCCGA CCAGCAAGTG GTGGTGCAGC GCCCCAGCCA CACCGCACAC
CTGGCCGCGC CCGACCCAGA CCAGGCACGC CAGGTACTCA GCGCCCGGCG CCTGGCCGAG
ACCACGCTGA TTACCCTGGC CGCGCAACGC GCCCGGCCGG CGCAGGTTCG CCAACTGCGG
CAACTGGTGG AGCGCGAGCG CCAGCACCAT GAAAGTGGTG AACGCTGTTC GGCGATCCGC
CTGGGCGGCG AGTTCCACCT GAAACTGGCG CAAGTGGCGG CCAACGCACC ACTGGCACGC
TTTCTCAATG GGCTGGTGCC GATGACCTCG CTGATCATCG CCCGCTACGA GTCGCCGTGC
TGTGACCACT GCGCGTGGCA AGAACATGCA GCAATCATCG ATGCCGTCGA GCAAGGTGAT
GCCGAGGCGG CCTTGGGGCT GATGCACAAA CACCTCGACC GCCTGGAAGA AAAGCTCGTC
CTGAAGTGA
 
Protein sequence
MNAAHHLPAL LAAGETRLSA EQIYPRLFDA ILEQRLPPGS LLPEEALGHA FGVSRTVIRR 
VLGRLSDQQV VVQRPSHTAH LAAPDPDQAR QVLSARRLAE TTLITLAAQR ARPAQVRQLR
QLVERERQHH ESGERCSAIR LGGEFHLKLA QVAANAPLAR FLNGLVPMTS LIIARYESPC
CDHCAWQEHA AIIDAVEQGD AEAALGLMHK HLDRLEEKLV LK