Gene PputGB1_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1875 
Symbol 
ID5869660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2111711 
End bp2112496 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID641546997 
Producthypothetical protein 
Protein accessionYP_001668114 
Protein GI167032883 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTAG GTTCTTTCGG TTTCACCATT GCTGGCCTGG TCGTGGGTTT CATCGTCGGT 
ATGACCGGCG TCGGTGGCGG CTCGCTGATG ACCCCGATCC TGTTGTGGTT TGGCATCAAC
CCGGCGACAG CAGTCGGCAC CGACCTACTC TATGCGGCCA TCACCAAGGC CAGTGGCGTC
TGGGTGCATG CGCGCCAAAA GAACATCGAC TGGAAGATCA CCGGCCTGCT CAGCCTGGGC
AGCGTGCCCG CTGCGGCGCT GACCTTGTGG TTCCTCAGCA CCCTGCACAC CGACACCTCG
GCGCTAAATG CGATCATCAA GCAAGGCCTG GCGGTGGTGC TGATCCTCAC TGCGCTGGCC
ATCCTGTTCA AATCGCGCCT GCAGGCCTTC GCCAGCCGCC ATGCCGGTGA CCACTACCAC
CTCAGTGACC GCAGCCTCAA TATCCTCACT GTGCTGACCG GTGTGGTGCT GGGCGTGATG
GTTACCCTCA CGTCCATCGG TGCTGGCGCA TTGGGCACCG TGGCGCTGTT CCTGCTTTAC
CCGTTCCTGG TCACCCGCCG GCTGGTCGGC ACCGAAATTG CCCACGCCGT ACCGTTGACA
CTGGTAGCAG GCCTGGGCCA CGCGGGCATG GGCAACATGG ACTGGTCGTT GCTGGGCTAC
CTGCTGTTGG GCTCGCTGCC GGGTATCTAC CTGGGCAGCC ACCTCACCGG ACGCATCTCC
GACCGCGTGC TGCGCCCGTG CCTGGCCGCC ATGCTGTTAC TGATCGGTTA CAAGCTCGCG
TTCTGA
 
Protein sequence
MDVGSFGFTI AGLVVGFIVG MTGVGGGSLM TPILLWFGIN PATAVGTDLL YAAITKASGV 
WVHARQKNID WKITGLLSLG SVPAAALTLW FLSTLHTDTS ALNAIIKQGL AVVLILTALA
ILFKSRLQAF ASRHAGDHYH LSDRSLNILT VLTGVVLGVM VTLTSIGAGA LGTVALFLLY
PFLVTRRLVG TEIAHAVPLT LVAGLGHAGM GNMDWSLLGY LLLGSLPGIY LGSHLTGRIS
DRVLRPCLAA MLLLIGYKLA F