Gene PputGB1_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1864 
Symbol 
ID5869649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2098084 
End bp2099892 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content62% 
IMG OID641546986 
ProductABC transporter 
Protein accessionYP_001668103 
Protein GI167032872 
COG category[R] General function prediction only 
COG ID[COG4178] ABC-type uncharacterized transport system, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.653168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGA ACTGGCACCA GGCCCTGCAA GAGAGCCTGA GCTGGCTGGC GATCGCCTCG 
TTCATCACCC TTGTCTGCTT CACTGCAGCC GCAGCACTGG CTGTGCGTTG CACGCGCTGG
GGTAGCCAGT TCTGGCAGCT CGCCGGGCCC TATTTCAGTT TCAGGCGCAG TTGGCGACCG
TTGCTGGTGT TTGCCCTTCT GCTGGTACTG ACGCTGTTCT CGGTTCGGCT CAATGTGCTG
TTTTCATTCT GGTACAACGG CTTCTACAGC GCCCTGCAGG GCCTCGACCA AGCCGCTTTC
TGGTACCTGC TCGGGGTCTT CGCGGTACTG GCCACCATCC ACGTGCTGCG CTCGTTGTTT
ACCTTCTATG TAAGCCAGGC ATTCAGCATC AAGTGGCGGG TCTGGTTGAC CGAGCGCCTG
ACCCACGACT GGATGCAGGG CGATGCCTAC TACCGTGGCC AGTTCCTCGC CGAGCTGGTG
GACAACCCCG ACCAGCGTAT CGAACTGGAC GTCAATGCCT TCGTCACCAA CTCGGTCACC
CTTGCCCTGG GTGCGGTCAG TGCGCTGGTT TCACTGGTGG CGTTCACCGG TATCCTCTGG
GGGCTCTCAG CACCGTTGAC AGTGGCCGGG GTGGAGATAC CTCGGGCGAT GGTGTTTGCC
GTGTACCTGT ATGTCATCGT CGCCACCTGG GTCGCCTTCC GCCTCGGGCG CCCGCTGATC
CGCCTGAACT TCCTCAACGA AAAACTCACC GCCAACTTCC GTTACGCGTT GATGCGCCTG
CGTGAGAACG CAGAGAACAT TGCCTTCTAT CAAGGTGCGC AAGTGGAGCG GGGCACGTTG
CTGGGCCGTT TTGCTGCCTT GATCGTCAAT GCCTGGGCAT TGGTGTTCCG GAACCTGAAG
TTCAGTGGCT TCAACCTGGG GGTCAGCCAG GTTGCCGTGG TGTTCCCGTT CATTCTCCAG
GCGCCGCGCT TCTTCAGTGG TGCGATCAAG CTGGGCGATG TCATGCAAAC GTCCCAGGCC
TTTGGCCAGG TGCAGGACTC TTTGTCGTTC TTCCGAGAGT CGTACGATGC GTTTGCCCAG
TATCGCGCTA CCCTCGACCG TCTGACTGGT TTTCTCGATG CTAACGAGCA GGCAAGTGGG
TTGCCGCGAG TGACTACCGA AGACCAGGCG CATGCGCTGC AGATCATGGG GCTGCAGGTA
CTACGCCCGG ACGGACACGC CCTTATCGCC GACCTGGACT TGAGCTTGCA TGCCGGTCAG
GCGCTGTTGA TCAAAGGGCC ATCGGGCAGT GGCAAGACCA CGCTGCTGCG CGCCCTGGCA
GGGTTGTGGC CGTATGCCGA AGGTGAAGTC AGGCGGCCGA CGGGTCACCA GGCGTTGTTC
CTGTCGCAGC GCCCGTACCT GCCGCTAGGT GATTTGCGTA CCGTCATTGC CTACCCGGCA
GCCGGCAAGC CCGAGGATGA GGCGCGAATG CAGCAGGCGT TGCGCCAGGT CAACCTGGCC
CACCTGGCCG AACGCCTGGA CGTCAGCAGC GACTGGTCAC ACATCCTCTC GGTGGGTGAG
CAGCAGCGCC TGGCGTTCGC CAGGGTGCTG TTCAACCGGC CGCAGGTGGT GTTCCTCGAC
GAGTCCACCT CAGCGATGGA TGAGGGGCTC GAGCATGCCC TGTATGCGCT GCTGCGCTCA
GAAATGCCGG GTGCATTGCT GGTCAGTGTC GGCCACCGCA GCACGCTGGC AGGGTTCCAT
ACCCACCGGC TGGAGGTGAA CGGGCAGGGC GGCTGGACGT TGCTGGAGCA GCAGGCAGCG
ATGGCCTAG
 
Protein sequence
MEMNWHQALQ ESLSWLAIAS FITLVCFTAA AALAVRCTRW GSQFWQLAGP YFSFRRSWRP 
LLVFALLLVL TLFSVRLNVL FSFWYNGFYS ALQGLDQAAF WYLLGVFAVL ATIHVLRSLF
TFYVSQAFSI KWRVWLTERL THDWMQGDAY YRGQFLAELV DNPDQRIELD VNAFVTNSVT
LALGAVSALV SLVAFTGILW GLSAPLTVAG VEIPRAMVFA VYLYVIVATW VAFRLGRPLI
RLNFLNEKLT ANFRYALMRL RENAENIAFY QGAQVERGTL LGRFAALIVN AWALVFRNLK
FSGFNLGVSQ VAVVFPFILQ APRFFSGAIK LGDVMQTSQA FGQVQDSLSF FRESYDAFAQ
YRATLDRLTG FLDANEQASG LPRVTTEDQA HALQIMGLQV LRPDGHALIA DLDLSLHAGQ
ALLIKGPSGS GKTTLLRALA GLWPYAEGEV RRPTGHQALF LSQRPYLPLG DLRTVIAYPA
AGKPEDEARM QQALRQVNLA HLAERLDVSS DWSHILSVGE QQRLAFARVL FNRPQVVFLD
ESTSAMDEGL EHALYALLRS EMPGALLVSV GHRSTLAGFH THRLEVNGQG GWTLLEQQAA
MA