| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1860 |
|---|
| Symbol | |
|---|
| ID | 5869640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2087735 |
|---|
| End bp | 2088853 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641546977 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001668099 |
|---|
| Protein GI | 167032868 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.227786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.178829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC CCAGTGCCAG CGAACCGAAA GCCGGCGTGG TGCTGCTCGA TACCCGCGAT
CACACCCCCG AACATGAGCA TGCCGTGCAC CTCAAGCTTG CCGATGGCCT GGCCGGCCTG
CTGGGCTGCC CGCACGTGAA ACCCACCCCC TCAGCAACCG CCGTCGATGG CTACTACTAC
CTGCCCACCG AAACCCTGAT CGACGCCAGA CGTCAGGCCG CTAGAGGTAT CCGCAGCGAG
CAGGATCTGT TTGGCGGGCT GGTCGACCAG CCCTACATGG CAACCAAGGC GATCTCTCAC
CCGCTACCGG CCGGGGCCAG TTTTCCGCCG GGCTGGACCG ATGACTTCGC CCGGCAGGCC
AGTGACGCCT TGCTGCGCGG CTATACCGTA TTCAGCAAAG CCGATGCGCG CACTGCTGCA
CAGCTACTGC TGCTCGACGG CCCCGTGCGG GTCAAGCCCG TGTTGGCCTG CGCAGGGCGC
GGGCAGCAAG TCATCACCCT GGCAGACGCG CTGGAGCCCC TGCTGGCCGC CATGGACGAC
CAGCAGTTGG CACGGTGGGG GCTGGTACTC GAAGAGGACT TGAGCGACGT GCAAACCTTC
AGCGTCGGCC AGGTGCGCGT CGCCGGCCTG ACCTGCAGCT ATCACGGCAC TCAACAACTG
ACCCGCGACC ATCAAGGCAC CGAGGTGTAC GGAGGTTCCG ACCTGGTGGT GGTACGCGGC
GACTACCAGG CACTCCTCCA GCTCCCCATG GAAGAGCACC TGCGACTGGC CATCAACCAG
GCCATCACCT ACGAGCAGGC TGCCGAGCAG CACTTCCCTG GTTTCATTGC CTCCCGGCGC
AACTACGACA TCGCCCGCGG CCTCGATTCG CAGGGCCACC TGCGCAGCGG CGTACTCGAA
CAATCCTGGC GCCTGGGCGG TGCCAGCAGC GCCGAGCTGT TGGCCCTGCA GGCTTTTGCC
GATGACCCGG CATTACAGCG GGTGCGAGCC TCTACCCATG AAGTGTTCGG CACCCCCGAC
CTGCCCACTG ACGCCACCCT CTTCTACCAA GGAAACGACA GTGAACTCGG ACAACTCAGC
AAATTTGCGC GGATTCGCGA ACATGACCAT TCAGAGTGA
|
|---|
| Protein sequence | MTMPSASEPK AGVVLLDTRD HTPEHEHAVH LKLADGLAGL LGCPHVKPTP SATAVDGYYY
LPTETLIDAR RQAARGIRSE QDLFGGLVDQ PYMATKAISH PLPAGASFPP GWTDDFARQA
SDALLRGYTV FSKADARTAA QLLLLDGPVR VKPVLACAGR GQQVITLADA LEPLLAAMDD
QQLARWGLVL EEDLSDVQTF SVGQVRVAGL TCSYHGTQQL TRDHQGTEVY GGSDLVVVRG
DYQALLQLPM EEHLRLAINQ AITYEQAAEQ HFPGFIASRR NYDIARGLDS QGHLRSGVLE
QSWRLGGASS AELLALQAFA DDPALQRVRA STHEVFGTPD LPTDATLFYQ GNDSELGQLS
KFARIREHDH SE
|
|---|
| |