Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1856 |
Symbol | |
ID | 5869636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2084917 |
End bp | 2085465 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546973 |
Product | isochorismatase hydrolase |
Protein accession | YP_001668095 |
Protein GI | 167032864 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.16857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC AGGCACTGAT CATCATCGAC ATCCAGAACG ACTACTTCCC GGGCGGCAAG TGGACACTTG ATGGCGCCGA CCAGGCGGCC GACAACGCTG CACGCTTGTT GGCAGCAGCG CGCCAGCGTG GCGACCTGGT GGTGCACGTG CGGCATGAGT TCGACAGCGC CGATGCGCCA TTCTTCGCCC CAGGCTCGCA GGGTGCGGCA ATCCACTCCA AGGTCGCGCC GGTAAAAGGC GAGCCGGTGG TGCTCAAGCA CAAGGTCAAT GCCTTCCTAG GCACCGAGCT TGAGCACACG CTGGACCGGC ATGGTGTCGA GGCCCTGACC ATTGCCGGCA GCATGAGCCA CATGTGCATC GACGCCGCTA CCCGCGCCGC GGCAGATTTG GGCTATACGG TGACCGTGGC GCACGATGCC TGCGCGACCC TACCACTGGA ATTCGACGGC AAGCAGGTGC CGGCGGCGCA GGTGCATGAT TCGGCGATGG CGGCGTTGGC GTTTGCCTAC GCCAAGGTGG TGAAGACCGA AGAACTGCTG AAAGATTGA
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Protein sequence | MSKQALIIID IQNDYFPGGK WTLDGADQAA DNAARLLAAA RQRGDLVVHV RHEFDSADAP FFAPGSQGAA IHSKVAPVKG EPVVLKHKVN AFLGTELEHT LDRHGVEALT IAGSMSHMCI DAATRAAADL GYTVTVAHDA CATLPLEFDG KQVPAAQVHD SAMAALAFAY AKVVKTEELL KD
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