Gene PputGB1_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1856 
Symbol 
ID5869636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2084917 
End bp2085465 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content63% 
IMG OID641546973 
Productisochorismatase hydrolase 
Protein accessionYP_001668095 
Protein GI167032864 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.16857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC AGGCACTGAT CATCATCGAC ATCCAGAACG ACTACTTCCC GGGCGGCAAG 
TGGACACTTG ATGGCGCCGA CCAGGCGGCC GACAACGCTG CACGCTTGTT GGCAGCAGCG
CGCCAGCGTG GCGACCTGGT GGTGCACGTG CGGCATGAGT TCGACAGCGC CGATGCGCCA
TTCTTCGCCC CAGGCTCGCA GGGTGCGGCA ATCCACTCCA AGGTCGCGCC GGTAAAAGGC
GAGCCGGTGG TGCTCAAGCA CAAGGTCAAT GCCTTCCTAG GCACCGAGCT TGAGCACACG
CTGGACCGGC ATGGTGTCGA GGCCCTGACC ATTGCCGGCA GCATGAGCCA CATGTGCATC
GACGCCGCTA CCCGCGCCGC GGCAGATTTG GGCTATACGG TGACCGTGGC GCACGATGCC
TGCGCGACCC TACCACTGGA ATTCGACGGC AAGCAGGTGC CGGCGGCGCA GGTGCATGAT
TCGGCGATGG CGGCGTTGGC GTTTGCCTAC GCCAAGGTGG TGAAGACCGA AGAACTGCTG
AAAGATTGA
 
Protein sequence
MSKQALIIID IQNDYFPGGK WTLDGADQAA DNAARLLAAA RQRGDLVVHV RHEFDSADAP 
FFAPGSQGAA IHSKVAPVKG EPVVLKHKVN AFLGTELEHT LDRHGVEALT IAGSMSHMCI
DAATRAAADL GYTVTVAHDA CATLPLEFDG KQVPAAQVHD SAMAALAFAY AKVVKTEELL
KD