Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1854 |
Symbol | |
ID | 5869634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2083268 |
End bp | 2084218 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546971 |
Product | hypothetical protein |
Protein accession | YP_001668093 |
Protein GI | 167032862 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.135486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGC CCAGCAGCAA GTCGACCTCC ACCGTTACCT TTCGCCTGAG CAAGGCCGAA CTGGTGCTGG TGTTCATCAC CATGTTGTGG GGCGGCACCT TCCTGCTGGT GCACAACGTG ATGACCGTCA GCGGCCCGAT GTTCTTCGTC GGCCTGCGCT TTGCGGCAGC CGCGCTGTTC GTAGCCGTGG TGTCGGCACG AGCGCTGCCT GGGCTGACCT TTACCGAACT GAAGGCCGGC ATGCTGATCG GTGTGTCGAT AATGCTCGGC TACGGCTTGC AGACCATGGG CCTGCAAACC ATCAGCAGCA GCCAGTCGGC GTTCATCACC GCACTTTACG TGCCGTTCGT GCCGCTGCTG CAGTGGCTGG TGCTGGGCCG GCGGCCTGGC CTGATGCCCA GCATCGGCAT TTGCCTGGCG TTCATCGGCC TGATGCTGCT GGCCGGGCCC GAAGGCGGCA GCCTGCACTT CAGCGAAGGC GAACTGGTCA CCTTGGTCAG CGCGGTGGCC ATTGCAGGCG AAATCATCCT GATCAGCCGC TATGCAGGCC AGGTCGATGT GCGACGGGTC ACCGTCGTGC AACTGGCGAC TGCTTCACTG CTAGCGTTCC TGATGATCGT GCCGACCCAG GAGCGCATCC CCGACTTCTC CTGGCTGCTG CTGACCAGCG CAGTGGGCCT GGGCGCCATG AGCGCAGTCA TTCAGGTGGC AATGAACTGG GCGCAAAAGT CGGTCTCCCC CACCCGCGCG ACCCTCATCT ATGCCGGTGA ACCGGTGTGG GCCGGTATCG TCGGGCGCCT AGCCGGCGAG CGCCTGCCGG GCGTGGCGCT GCTTGGCGGC TTGCTGATCG TGATCGCGGT GGTGGTCAGC GAACTCAAGG TGCGCCGCCC GCGCGAAGCC GATGCCGCAC AGGACGTGCA AAATTCAGGC GAGCGCCAGG CAGGGCTGTA A
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Protein sequence | MSQPSSKSTS TVTFRLSKAE LVLVFITMLW GGTFLLVHNV MTVSGPMFFV GLRFAAAALF VAVVSARALP GLTFTELKAG MLIGVSIMLG YGLQTMGLQT ISSSQSAFIT ALYVPFVPLL QWLVLGRRPG LMPSIGICLA FIGLMLLAGP EGGSLHFSEG ELVTLVSAVA IAGEIILISR YAGQVDVRRV TVVQLATASL LAFLMIVPTQ ERIPDFSWLL LTSAVGLGAM SAVIQVAMNW AQKSVSPTRA TLIYAGEPVW AGIVGRLAGE RLPGVALLGG LLIVIAVVVS ELKVRRPREA DAAQDVQNSG ERQAGL
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