Gene PputGB1_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1854 
Symbol 
ID5869634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2083268 
End bp2084218 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content65% 
IMG OID641546971 
Producthypothetical protein 
Protein accessionYP_001668093 
Protein GI167032862 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.135486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC CCAGCAGCAA GTCGACCTCC ACCGTTACCT TTCGCCTGAG CAAGGCCGAA 
CTGGTGCTGG TGTTCATCAC CATGTTGTGG GGCGGCACCT TCCTGCTGGT GCACAACGTG
ATGACCGTCA GCGGCCCGAT GTTCTTCGTC GGCCTGCGCT TTGCGGCAGC CGCGCTGTTC
GTAGCCGTGG TGTCGGCACG AGCGCTGCCT GGGCTGACCT TTACCGAACT GAAGGCCGGC
ATGCTGATCG GTGTGTCGAT AATGCTCGGC TACGGCTTGC AGACCATGGG CCTGCAAACC
ATCAGCAGCA GCCAGTCGGC GTTCATCACC GCACTTTACG TGCCGTTCGT GCCGCTGCTG
CAGTGGCTGG TGCTGGGCCG GCGGCCTGGC CTGATGCCCA GCATCGGCAT TTGCCTGGCG
TTCATCGGCC TGATGCTGCT GGCCGGGCCC GAAGGCGGCA GCCTGCACTT CAGCGAAGGC
GAACTGGTCA CCTTGGTCAG CGCGGTGGCC ATTGCAGGCG AAATCATCCT GATCAGCCGC
TATGCAGGCC AGGTCGATGT GCGACGGGTC ACCGTCGTGC AACTGGCGAC TGCTTCACTG
CTAGCGTTCC TGATGATCGT GCCGACCCAG GAGCGCATCC CCGACTTCTC CTGGCTGCTG
CTGACCAGCG CAGTGGGCCT GGGCGCCATG AGCGCAGTCA TTCAGGTGGC AATGAACTGG
GCGCAAAAGT CGGTCTCCCC CACCCGCGCG ACCCTCATCT ATGCCGGTGA ACCGGTGTGG
GCCGGTATCG TCGGGCGCCT AGCCGGCGAG CGCCTGCCGG GCGTGGCGCT GCTTGGCGGC
TTGCTGATCG TGATCGCGGT GGTGGTCAGC GAACTCAAGG TGCGCCGCCC GCGCGAAGCC
GATGCCGCAC AGGACGTGCA AAATTCAGGC GAGCGCCAGG CAGGGCTGTA A
 
Protein sequence
MSQPSSKSTS TVTFRLSKAE LVLVFITMLW GGTFLLVHNV MTVSGPMFFV GLRFAAAALF 
VAVVSARALP GLTFTELKAG MLIGVSIMLG YGLQTMGLQT ISSSQSAFIT ALYVPFVPLL
QWLVLGRRPG LMPSIGICLA FIGLMLLAGP EGGSLHFSEG ELVTLVSAVA IAGEIILISR
YAGQVDVRRV TVVQLATASL LAFLMIVPTQ ERIPDFSWLL LTSAVGLGAM SAVIQVAMNW
AQKSVSPTRA TLIYAGEPVW AGIVGRLAGE RLPGVALLGG LLIVIAVVVS ELKVRRPREA
DAAQDVQNSG ERQAGL