| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1853 |
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| Symbol | |
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| ID | 5869633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2080203 |
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| End bp | 2083118 |
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| Gene Length | 2916 bp |
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| Protein Length | 971 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546970 |
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| Product | putative monovalent cation/H+ antiporter subunit A |
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| Protein accession | YP_001668092 |
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| Protein GI | 167032861 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | [TIGR00940] Tmonovalent cation:proton antiporter
[TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.126065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTGA TAGTGCTACT GCTTCTGCCG TTCGTGGGCA GTTGCCTGGC AGCCGTGCTG
CCGCACAACG CACGTAACGC CGAGTCCATT CTTGCCGGGC TCGTAGCCCT GGTCGGTACC
GTCCAGGTAG CACTTCTGTA CCCTCAGATT GCCCACGGTG GCGTAATTCG CGAAGAATTC
CTGTGGCTGC CCAGCCTGGG GTTGAACCTG GTGCTGCGCA TGGACGGCTT TGCCTGGCTG
TTCTCGTTGC TGGTGCTGGG CATTGGTACG CTGGTGTCGC TGTATGCCCG CTACTACATG
TCGCCGCAAG ACCCGGTACC GCGTTTCTTC GCCTTCTTCC TGGCCTTCAT GGGCGCCATG
CTCGGCCTGG TGATCTCCGG CAACCTGATC CAGCTGGTGT TCTTCTGGGA ACTCACCAGC
CTGTTCTCCT TCCTGCTCAT CGGCTACTGG CACCACCGCG CCGACGCCCG CCGCGGCGCC
TACATGGCGC TGATGGTCAC CGGCGCGGGC GGTTTGTGCC TGTTGGTAGG GGCCCTGCTG
CTAGGCCATG TGGTCGGCAG CTACGACCTG GACAAGGTCC TGGCTGCCGG CGACACCATC
CGCCAGCATG CGCTGTACCC GGTGCTGCTG CCCCTGATCC TCATCGGCGC CCTGAGCAAG
AGCGCACAGT TCCCCTTCCA TTTCTGGCTG CCCCACGCCA TGGCAGCGCC CACCCCGGTA
TCGGCCTATC TGCACTCCGC CACCATGGTC AAGGCGGGCG TGTTCCTGCT GGCGCGCTTC
TGGCCGGTGC TGTCGGGCAG CGATGAGTGG TTCTGGATCG TCGGCGGCGC CGGCGCCCTC
ACTCTGCTGC TCGGCGCTTT CGCCGCCATG TTCCAGAACG ACCTCAAGGG CCTGCTGGCC
TATTCGACCA TCAGCCACCT GGGCCTCATT ACCCTGCTGC TAGGTCTGAA CAGCCCGCTG
GCGGCCGTTG CCGCCGTGTT CCACATTCTC AACCATGCCA CCTTCAAAGC CTCCCTGTTC
ATGGCCGCCG GTATCATCGA CCACGAAAGC GGTACGCGTG ACATCCGCCG CCTCAGTGGC
CTGATCCGCC TGGTGCCATA CACCGCCACC CTGGCCATGG TGGCCAGCGC CTCGATGGCC
GGCGTCCCGT TGATGAACGG CTTCCTGTCG AAAGAAATGT TCTTCGCCGA AACCGTATTC
ATCAGCTCCA CCGCCTGGGT CGAAACGACG TTGCCGGTGA TCGCCACCCT GGCCGGTACC
TTCAGCGTGG CTTATGCCCT GCGCTTCACG GTCGATGTGT TCTTCGGGCC GCCAGCCCAG
GACCTGCCCC ATACCCCGCA CGAGCCGCCA CGCTGGATGC GTGCGCCGGT CGAGCTGCTG
GTGCTCACCT GCCTGGTAGT GGGCATCTTC CCTGCTCAGT CGGTCGGCCC GCTGCTGGCC
GCTGCGGCCC TGCCGGTAGT AGGCGGCACA CTGCCGGAAT ACAGCCTGGC CATCTGGCAT
GGCTGGAACG CACCGCTGAT CATGAGCCTG GTGGCCATGA GCGGCGGCAT CGTCCTGTAC
CTGCTGCTGC GCAAGCAGCT GCGCCTGGGC CGCTTCCCCT ACCCACCGCT GATCGAGCGC
TTCAACGGCA AGCGCCTGTT CGAGCACGGC CAAGTGCACC TGATGCTGCT GGCACGTCGC
ATCGAGCGCC TGTTCACCAC CCGTCGCCTG CAGTCGCAGC TGTTCATGCT GGTCGTCGCC
GCGTTTCTTG CTGGCCTCAC GCCCATGCTC TACAGCGGCC TGAGCTGGGG CGACCGGCCG
AAGATTCCGG GCTCGGGTGT GTTCGTCGCC CTGTGGCTGA TCGCCATTGC CTGCGCCATC
GGCGCCGCCT ACCAGGCCAA ATACCACCGT CTGGCAGCAC TGATCATGGT CAGCGTCTGC
GGCTTGATGA CCTGCATCAC CTTCGTCTGG TTCTCCGCGC CCGATCTGGC CCTGACCCAG
TTGGTGGTGG AAGTGGTGAC TACTGTGCTG ATCTTGCTCG GCTTGCGCTG GTTGCCGCGG
CGGATCGAAG GTGTGTCGCC GCTGCCCGGC AGCCTGGAGC GCGCGCGCAT GCGCCGCCTG
CGCGACCTGC TGCTGGCGGT GCTGGTAGGG GGCGGCATGG CCGTGCTGTC CTACGCGATG
CTGACCCGGC CGACGCCCAA CGATATTTCC TCGTTCTACC TGAGTCGGGC GCTGCCTCAG
GGCGGTGGTA CCAATGTGGT CAATGTCATG CTGGTCGACT TCCGCGGCTT CGATACCCTC
GGTGAAATTA CCGTGCTGGT GGCCGTGGCG CTGACCGTGT TCGCCCTGCT GCGGCGCTTC
CGCCCACCGA AGGAGAGCAT GCAACTGCCG GCGCAGCAGC GCCAGCTGGC GCCCGACGTG
GTCACCGACC TGATCAACCC GCGGCACGCC ACCGACACCG CACTCGGTTT CATGATGGTG
CCGGCGGTAC TGGTGCGCCT GCTGCTGCCA ATCGCCCTGC TGGTGTCGAT GTACTTGTTC
ATGCGCGGGC ACAACCAGCC GGGCGGTGGC TTTGTCGCCG GCCTGGTGAT GTCGGTGGCG
TTCATCCTGC AGTACATGGT GGCCGGCACC CAGTGGGTCG AAGCACAGAT GAGCCTGCGG
CCGCTGCGCT GGATGGGCAC CGGGCTGCTG TGCGCGACCC TGACTGGGGT CGGTGCCATG
TTGCTTGGCT ATCCGTTCCT CACCACTCAT ACCGCCCACC TGCACCTGCC GTTGCTCGGT
GACGTGCACG TGGCCAGCGC GCTGTTCTTC GATGTCGGCG TGTACACCGT GGTGGTCGGC
TCGACGCTGT TGATCCTCAC GGCCCTGGCG CACCAGTCGG TGCGCGCCTA CCGCCCGGGC
AACCCGGCGA AAACCAGCCA AGCAGGAGCC GCCTGA
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| Protein sequence | MSLIVLLLLP FVGSCLAAVL PHNARNAESI LAGLVALVGT VQVALLYPQI AHGGVIREEF
LWLPSLGLNL VLRMDGFAWL FSLLVLGIGT LVSLYARYYM SPQDPVPRFF AFFLAFMGAM
LGLVISGNLI QLVFFWELTS LFSFLLIGYW HHRADARRGA YMALMVTGAG GLCLLVGALL
LGHVVGSYDL DKVLAAGDTI RQHALYPVLL PLILIGALSK SAQFPFHFWL PHAMAAPTPV
SAYLHSATMV KAGVFLLARF WPVLSGSDEW FWIVGGAGAL TLLLGAFAAM FQNDLKGLLA
YSTISHLGLI TLLLGLNSPL AAVAAVFHIL NHATFKASLF MAAGIIDHES GTRDIRRLSG
LIRLVPYTAT LAMVASASMA GVPLMNGFLS KEMFFAETVF ISSTAWVETT LPVIATLAGT
FSVAYALRFT VDVFFGPPAQ DLPHTPHEPP RWMRAPVELL VLTCLVVGIF PAQSVGPLLA
AAALPVVGGT LPEYSLAIWH GWNAPLIMSL VAMSGGIVLY LLLRKQLRLG RFPYPPLIER
FNGKRLFEHG QVHLMLLARR IERLFTTRRL QSQLFMLVVA AFLAGLTPML YSGLSWGDRP
KIPGSGVFVA LWLIAIACAI GAAYQAKYHR LAALIMVSVC GLMTCITFVW FSAPDLALTQ
LVVEVVTTVL ILLGLRWLPR RIEGVSPLPG SLERARMRRL RDLLLAVLVG GGMAVLSYAM
LTRPTPNDIS SFYLSRALPQ GGGTNVVNVM LVDFRGFDTL GEITVLVAVA LTVFALLRRF
RPPKESMQLP AQQRQLAPDV VTDLINPRHA TDTALGFMMV PAVLVRLLLP IALLVSMYLF
MRGHNQPGGG FVAGLVMSVA FILQYMVAGT QWVEAQMSLR PLRWMGTGLL CATLTGVGAM
LLGYPFLTTH TAHLHLPLLG DVHVASALFF DVGVYTVVVG STLLILTALA HQSVRAYRPG
NPAKTSQAGA A
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