| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1851 |
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| Symbol | |
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| ID | 5869631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2078183 |
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| End bp | 2079862 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546968 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_001668090 |
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| Protein GI | 167032859 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.059579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGCA TGAGTCAACT GATCGTCGCC CCCATTCTGC TGCCGCTGAT TACTGCATCG
GTGATGTTGC TGCTGGGTGA AAAGCACAGG CATATCAAGG CCAGGCTGAA CCTGCTGTCA
ACCTTCGCCG GCCTGGTCAT CGCGGTCTCT CTGCTGCTGT GGGTGCGGAC CCAGGGCCAG
GCAGAGTCGA TAGGCGTGTA CCTGCCGGGT AACTGGCCGG CGCCATTCGG CATCGTGCTG
GTGGTGGACC ACTTGTCTGC GCTCTTGCTG ACCCTGACCG GGGTGATCGG TTTCAGTGCG
CTACTGTTTG CCCGTGCCCG CTGGGACGGC GCCGGGGCCA GCTTCCATGC GCTGTTCCAG
ATCCAGCTGA TGGGCCTGTA CGGGGCCTTC CTCACCGCCG ACCTGTTCAA CCTGTTCGTG
TTCTTCGAAG TGCTGCTGGC CGCCTCCTAT GGCCTGCTGC TGCATGGCTC GGGTCGCGCT
CGGGTGCGCG CCGGCCTGCA CTACATCGCC ATCAACCTGT TCGCCTCATC GTTGTTCCTG
ATCGGCGCAG CAATGCTGTA TGGCGTGACC GGTACCTTGA ACATGGCCGA TCTGGCACTG
AAGATTCCAC TGGTACCGGA GGCCGACCGT GGCCTGCTGC ATGCCGGCGC GGCAATCCTG
GCCATGGCCT TCCTGGTCAA GGCCGGTATC TGGCCGCTGA ACTTCTGGCT GGTGCCAGCC
TACGCCTCGG CCAGTGCGCC GGTGGCTGCG CTGTTCGCCA TCATGACCAA AGTCGGCCTG
TACGCCGTGC TGCGCCTGTG GACGCTGCTG TTCTCCGGGC AGGCCGGAGC CTCGGCGCAT
TTCGGCGGCG AGTGGCTGGT GTACGGCGGC CTGGTCACTC TGGCGGTGGC AGCAGTATCG
ATCCTTGCCG CACAGCGCCT GGAGCGCATG GCGGCCCTGA GCATACTGGT CTCGGCCGGC
ACCCTGCTCG GCGCCGTCGG CTTTGCCCAG TCGGCGCTGA CCGGCGCGGC GTTGTTCTAT
CTGGTCAATT CGACCCTCGC GCTGTGCGCA CTGTTCCTGC TCGCTGAACT GGTCGAGCGT
TCGCGCTCGG CCAATGAAGC ACCGCTGGAC GAAGAAGAAG ACGCCATGCC CCCACCGCTG
GAATCGCTGC ACCCGCCCAA AGGCATCAAC CTCGACGATG AGCAGAAGGC GGTGATCGGC
CAGATCATCC CGTGGACCAT GGCCTTCCTT GGCCTCAGCT TCATCGCTTG TGCGCTGCTG
ATCATCGGCA TGCCGCCGCT GTCGGGTTTT GTCGCCAAGC TCAACCTTAT CAGCGCGCTA
TTCAACCCAC TGGGCCTCGG CGTGCCCGCC GAACAGCCGC TGAGTGTGGC CGGCTGGGGT
CTCGTGGCCT TGCTGATCCT CTCCGGTTTG GCTTCGCTGA TCGCCTTCGG CCGCGTTGGC
ATCCAGCGTT TCTGGAAACC CGAAGAACGG CCCTCGCCGG TACTGCGCCG CTATGAGTGC
CTGCCGATCG TCATCCTGCT CGGCCTGTGC ATCATACTCA GCCTCAAGGC CGAGCCGTTG
CTGCGCTACA CCCAGGACAC AGCTGCCAGC CTGCAGGCCC CGGACGCCTA TATCGAAGCC
GTGATGGCCG CCCGGCCGAT TCCTGGCCCC ACCACGCTCG ACGTACAGGT GCAGCCATGA
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| Protein sequence | MSGMSQLIVA PILLPLITAS VMLLLGEKHR HIKARLNLLS TFAGLVIAVS LLLWVRTQGQ
AESIGVYLPG NWPAPFGIVL VVDHLSALLL TLTGVIGFSA LLFARARWDG AGASFHALFQ
IQLMGLYGAF LTADLFNLFV FFEVLLAASY GLLLHGSGRA RVRAGLHYIA INLFASSLFL
IGAAMLYGVT GTLNMADLAL KIPLVPEADR GLLHAGAAIL AMAFLVKAGI WPLNFWLVPA
YASASAPVAA LFAIMTKVGL YAVLRLWTLL FSGQAGASAH FGGEWLVYGG LVTLAVAAVS
ILAAQRLERM AALSILVSAG TLLGAVGFAQ SALTGAALFY LVNSTLALCA LFLLAELVER
SRSANEAPLD EEEDAMPPPL ESLHPPKGIN LDDEQKAVIG QIIPWTMAFL GLSFIACALL
IIGMPPLSGF VAKLNLISAL FNPLGLGVPA EQPLSVAGWG LVALLILSGL ASLIAFGRVG
IQRFWKPEER PSPVLRRYEC LPIVILLGLC IILSLKAEPL LRYTQDTAAS LQAPDAYIEA
VMAARPIPGP TTLDVQVQP
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