Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1844 |
Symbol | |
ID | 5869624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2075247 |
End bp | 2075651 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641546961 |
Product | TraR/DksA family transcriptional regulator |
Protein accession | YP_001668083 |
Protein GI | 167032852 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1734] DnaK suppressor protein |
TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0449164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0842967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGG AACAGTTGCT GGCCATGTCG GCCGATGACT ACATGAACGC CGACCAGCTG GCCTTCTTCA CTGAGCTGCT GCAGGCGATG AAAGTCGAAA CCCATGAACG CATCGAGCTC AGCCGCACCA CCATCGAAGG CCTTGACACC CCGTCGGACC CTGCCGACGT GGCTTCGGTC GAAGAAGAAC GTAGCTGGCT GGTAAATGCC ATCGACCGCG ACCAACGCCT GCTGCCACAG CTGGAAATGG CCCTGGACCG CATTACCGAC GAAAGCTTCG GCTGGTGCGA TGACAGTGGT GAGCCAATCG GCCTGAAGCG CCTGCTGATC AGCCCGACCA CCAAGTACTG CATCGAAGCC CAGGAGCGCC ACGAGCAGCT CGACCGCCAC CAGCGCCAGG TATAA
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Protein sequence | MTKEQLLAMS ADDYMNADQL AFFTELLQAM KVETHERIEL SRTTIEGLDT PSDPADVASV EEERSWLVNA IDRDQRLLPQ LEMALDRITD ESFGWCDDSG EPIGLKRLLI SPTTKYCIEA QERHEQLDRH QRQV
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