Gene PputGB1_1844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1844 
Symbol 
ID5869624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2075247 
End bp2075651 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content60% 
IMG OID641546961 
ProductTraR/DksA family transcriptional regulator 
Protein accessionYP_001668083 
Protein GI167032852 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0449164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0842967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGG AACAGTTGCT GGCCATGTCG GCCGATGACT ACATGAACGC CGACCAGCTG 
GCCTTCTTCA CTGAGCTGCT GCAGGCGATG AAAGTCGAAA CCCATGAACG CATCGAGCTC
AGCCGCACCA CCATCGAAGG CCTTGACACC CCGTCGGACC CTGCCGACGT GGCTTCGGTC
GAAGAAGAAC GTAGCTGGCT GGTAAATGCC ATCGACCGCG ACCAACGCCT GCTGCCACAG
CTGGAAATGG CCCTGGACCG CATTACCGAC GAAAGCTTCG GCTGGTGCGA TGACAGTGGT
GAGCCAATCG GCCTGAAGCG CCTGCTGATC AGCCCGACCA CCAAGTACTG CATCGAAGCC
CAGGAGCGCC ACGAGCAGCT CGACCGCCAC CAGCGCCAGG TATAA
 
Protein sequence
MTKEQLLAMS ADDYMNADQL AFFTELLQAM KVETHERIEL SRTTIEGLDT PSDPADVASV 
EEERSWLVNA IDRDQRLLPQ LEMALDRITD ESFGWCDDSG EPIGLKRLLI SPTTKYCIEA
QERHEQLDRH QRQV