Gene PputGB1_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1843 
Symbol 
ID5869623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2074139 
End bp2074912 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content61% 
IMG OID641546960 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001668082 
Protein GI167032851 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0607617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0948943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCG AAACCATCCT GTTGGACATC CACGGCAAGG TCGGCCTGAT CACCCTCAAC 
CGCCCGCAAG CCCTCAATGC GCTGAACGCG CAGATTGTCG GCGAGATCAA CCAGGCCCTT
GACCAGCTCG AGCGTGACCC GAATATCGGT TGCGTGGTGC TGACAGGTTC GGCCAAGGCC
TTTGCCGCTG GCGCCGACAT CAAGGAAATG GCCGAACTGC AATACCCGCA GATCTACGTC
GACGACCTGT TCAGCGATGC TGACCGCATT GCCAACCGGC GCAAGCCGAT CATCGCGGCG
GTCTCCGGCT TCGCGCTGGG CGGCGGCTGC GAGTTGGCGA TGATGTGTGA CTTTATCCTC
GCCGCCGACA ACGCCAAGTT CGGTCAACCG GAAATCAACC TTGGCGTGTT GCCGGGCATG
GGCGGTACCC AGCGTCTGAC CCGTGCCGTG GGTAAGGCCA AGGCCATGGA ACTGTGCCTG
ACTGGCCGCC TGATGGGGGC TGAAGAGGCT GAGAGGGCTG GCTTGGTGGC GCGAATCGTG
CCGCAGGCGG AGTTGCTGGA AGAGGCGCTT AAGGTGGCTG CGACCATTGC CAGCAAATCG
ATCCCGGTGA GCATGATGGT CAAGGAGAGC GTTAACCGAG CGTTTGAAGT TACCCTCAGC
GAGGGCGTGC GCTTTGAACG CCGGGTCTTC CATGCGGCTT TCTCCACTGA AGACCAAAAA
GAAGGCATGG CCGCCTTCAT CGCCAAGCGC GAGGCGCAGT TCAAGGATCG TTGA
 
Protein sequence
MAFETILLDI HGKVGLITLN RPQALNALNA QIVGEINQAL DQLERDPNIG CVVLTGSAKA 
FAAGADIKEM AELQYPQIYV DDLFSDADRI ANRRKPIIAA VSGFALGGGC ELAMMCDFIL
AADNAKFGQP EINLGVLPGM GGTQRLTRAV GKAKAMELCL TGRLMGAEEA ERAGLVARIV
PQAELLEEAL KVAATIASKS IPVSMMVKES VNRAFEVTLS EGVRFERRVF HAAFSTEDQK
EGMAAFIAKR EAQFKDR