| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1840 |
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| Symbol | |
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| ID | 5869620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2071017 |
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| End bp | 2071784 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641546957 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001668079 |
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| Protein GI | 167032848 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.172822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.134322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATAG CCAACAAACA CTTCATCGTC AGCGGCGCCG CTTCCGGGCT GGGTGCCGCT
ACTGCTCAGA TGCTGGTCGA GGCCGGCGCC AAGGTCATGC TGGTCGACCT CAATGCCCAG
GCCGTCGAGG CCAAGGCTCG CGAGCTGGGC GACAACGCCC GCTTCGCGGT GGCCGACATC
AGCGACGAGC AGGCTGCCCA GGCGGCGGTC GATGCAGCCG TCAACGCCTT TGGCAGCTTG
CATGGGCTGG TCAATTGCGC CGGCATCGTC GGTGCTGAGA AGGTGTTGGG CAAGCAGCTC
CCGCATGGCC TGGGCAGCTT CGCCAAGGTC ATCAACGTCA ACCTGATCGG CAGCTTCAAC
CTGCTGCGTC TGGCTGCTGC GGCCATGGCC GAAGGGGCTG CCGACGAGGG GGGCGAACGC
GGGGTGATCA TCAACACTGC GTCCATTGCC GCCTATGACG GGCAGATCGG CCAGGCCGCC
TACGCGGCCT CCAAGGGCGC TATCGCCAGC CTGACCTTGC CGGCCGCCCG CGAACTGGCG
CGCTTCGGTA TCCGTGTGAT GACCATCGCC CCAGGCATCT TCGAAACACC GATGATGGCC
GGGATGACTG AGGACGTGCG TGCTTCGCTG GCTGCCGGCG TGCCGTTCCC GCCGCGTCTG
GGTCGCCCCC AGGAATATGC CGCACTGGCC CGTCACATCA TCGAGAACAG CATGCTCAAC
GGCGAGGTGA TCCGCCTCGA CGGTGCACTG CGCATGGCTG CCAAGTAA
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| Protein sequence | MHIANKHFIV SGAASGLGAA TAQMLVEAGA KVMLVDLNAQ AVEAKARELG DNARFAVADI
SDEQAAQAAV DAAVNAFGSL HGLVNCAGIV GAEKVLGKQL PHGLGSFAKV INVNLIGSFN
LLRLAAAAMA EGAADEGGER GVIINTASIA AYDGQIGQAA YAASKGAIAS LTLPAARELA
RFGIRVMTIA PGIFETPMMA GMTEDVRASL AAGVPFPPRL GRPQEYAALA RHIIENSMLN
GEVIRLDGAL RMAAK
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