| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1828 |
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| Symbol | |
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| ID | 5869608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2049350 |
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| End bp | 2051050 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641546945 |
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| Product | CopA family copper resistance protein |
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| Protein accession | YP_001668067 |
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| Protein GI | 167032836 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.349275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCA ACCCCTCCCG CCGTACCTTC GTCAAAGGCC TGGGCGCCGC CAGCACACTG
GCGGGCCTGG GGCTGTGGCG CCCGCTGGCC CAGGCCGCCG AAGGCCGTGA CCTGGCCGGC
CAGCACTTCG AGCTGTTCAT CGGCCAGACG CCGGTGAACA TCACTGGCCG CCCGCGCACC
GCATTGACCA TCAACAACAG CCTGCCCGGC CCTCTGCTGC GCTGGCGCGA AGGCGACACC
GTGACCCTGC GCGTGCGCAA CCGCCTGGCA CAGGACACCT CGATCCATTG GCACGGCATC
ATCCTGCCGG CCAACATGGA CGGCGTACCT GGCCTGAGCT TCGCCGGCAT CGAGCCCGGC
GGCGACTACC GGTACCAGTT CACCCTGCGC CAAAGCGGCA CCTACTGGTA CCACAGCCAT
TCGGGGCTGC AGGAACAGGC CGGGGTATAC GGGGCGATCG TGATCGAACC CCGCGAGCCC
GAAGCGCATC GCTACCAGCG CGACCATGTG CTGCTGTTCA GCGACTGGTC CGACCAGGCG
CCGGAGCAAT TGATGGCCAC GCTGAAGAAA CAGTCCGACG CGTACAACTA CCACAAGCGC
ACCGTCGGCG ACTTCATCGA CGACGTTGCC GATAAGGGCT GGAGCCCGAC CGTCGCCGAG
CGCACGGCCT GGGCACGCAT GCGCATGAGC CCCACCGACC TGGCGGATAT CAGCGCCGCC
ACCTACACCT ACCTGCTCAA CGGCCAGCCG CCGGAGGGCA ACTTCACCTG CCTGTTCCAG
CCGGGCGAGA CCGTGCGTCT ACGGCTGATC AACGCTTCGG CCATGACCTA TTTCGACTTC
CGCATCCCTG GGCTTAAGCT GACGGTGATC GCCGCCGACG GCTTGCCGGT GACGCCGGTG
AGCGTGGACG AACTGCGCAT TGCCGTGGCC GAGACCTACG ACGTGCTGGT GACCGTGGGC
GACCAACCTG CCTACACCCT GTTCGCCCAG AGCATGGACC GCACCGGCTT CGCCCGCGGC
ACCCTGGCTC GCGCCGCCGG GCTACAGGCG CCAGTGCCTG CACCCGACCC GCGCCCGGTC
TTGAGCATGG ATGACATGGG CCACGGTGGC ATGGGCGCCA TGGCCAGCAT GGACCACAGC
AACATGGCCG GCATGGACCA CGCCGCCATG TCGGCCATGC AGCAACACCC GGCCAGCGAA
ACCGACAACC CGCTCGTGGA CATGCAGACC ATGGCCCCAC GCGCCAACCT GGCCGACCCT
GGTATCGGCC TGCGCAACAA TGGCCGCCGC GTACTCACCT ATGCCGACCT GCGCAGCCCC
TACCCCGACC CCGACGGCCG CACGCCATCA AGAGACATCG AGCTGCACCT GACCGGCCAC
ATGGAGCGCT TCGCCTGGTC GTTCGACGGC ATCAAGTTCA GTGATGCCGA GCCGTTGCGC
CTGACCTACG GCGAGCGGGT CCGCATCACC CTGGTCAACG ACACCATGAT GACCCACCCC
ATCCACTTGC ACGGCATGTG GAGCGACCTG GAAGACGAGC ACGGCCAGTT CCTGGTGCGC
AAGCACACCC TCGACATCCC GCCCGGCAGC CGCCGTTCCT ACCGGGTGAC CGCCGATGCG
TTGGGCCGCT GGGCCTATCA CTGCCACCTG CTCTACCACA TGGAGACCGG CATGTTCCGC
GAGGTACGCG TCGATGAATG A
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| Protein sequence | MLRNPSRRTF VKGLGAASTL AGLGLWRPLA QAAEGRDLAG QHFELFIGQT PVNITGRPRT
ALTINNSLPG PLLRWREGDT VTLRVRNRLA QDTSIHWHGI ILPANMDGVP GLSFAGIEPG
GDYRYQFTLR QSGTYWYHSH SGLQEQAGVY GAIVIEPREP EAHRYQRDHV LLFSDWSDQA
PEQLMATLKK QSDAYNYHKR TVGDFIDDVA DKGWSPTVAE RTAWARMRMS PTDLADISAA
TYTYLLNGQP PEGNFTCLFQ PGETVRLRLI NASAMTYFDF RIPGLKLTVI AADGLPVTPV
SVDELRIAVA ETYDVLVTVG DQPAYTLFAQ SMDRTGFARG TLARAAGLQA PVPAPDPRPV
LSMDDMGHGG MGAMASMDHS NMAGMDHAAM SAMQQHPASE TDNPLVDMQT MAPRANLADP
GIGLRNNGRR VLTYADLRSP YPDPDGRTPS RDIELHLTGH MERFAWSFDG IKFSDAEPLR
LTYGERVRIT LVNDTMMTHP IHLHGMWSDL EDEHGQFLVR KHTLDIPPGS RRSYRVTADA
LGRWAYHCHL LYHMETGMFR EVRVDE
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