| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1827 |
|---|
| Symbol | |
|---|
| ID | 5869607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2048482 |
|---|
| End bp | 2049357 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641546944 |
|---|
| Product | copper resistance B precursor |
|---|
| Protein accession | YP_001668066 |
|---|
| Protein GI | 167032835 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3667] Uncharacterized protein involved in copper resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.193991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACA CCCGCAAAAG CATCATGGCT GGCGTGACGC TGCTGACCTT GCTCGCCAGC
GAACGGGCGA TGGCCGCTGG CATGGCACAC ATGAACCACG CCAGCATGGA GCACGGCACC
ATGAACCATG AAAGCATGGG CCATGGCCAG GCAACCCCCA GCCAGCCTCG CACGCCGCTG
CCAGCCATCA CCGACGCCGA CCGCCGCGCC GCCTTCCCAC CTTTGCCCGG GCACCAGGTG
CATGACAGGG CGCTGAACTG GGCGGTGGTC GTGGACAAAC TCGAATACCA GAACTTCGAG
AGCAGCAGTG CCCTGAACTG GAATGCCACC GCCTGGGTCG GCGGCGATAT CGACCGCCTG
TGGCTACGCA GTGAAGGCGA GCGCGAACAG GGCAAGACCC ACAAGGCCGA GCTGCAGGCA
CTGTGGGGCC ATGCGGTGAG CCCGTGGTGG GAGCTGGTGG CCGGCGTGCG CCAGGACTTC
AAGCCAGCCA GCGGCCAGGC TTGGGCCGCC TTCGGTATCC AGGGCACGCC ATTGTACGGC
CTGGAGCTGC AAACCACCGC TTATGCCGGC GAGCGGCAAC AGACCGCGCT GCGCCTGGAA
GCCGCTTACG CTATGCTGCT GACCAACCGC TGGATACTGG AACCGACCCT GGAAGCCAAC
CTCTACGGCC GCAATGACGC CGGGCGCGAG CAAGGCGCGG GGCTGGCCGA CAGCGAAGTG
GGCCTGCGCC TGCGCTACGA AATCACGCGC GGCTTCGCCC CCTACGTCGG GGTCAGTTTC
AACCGCCTGC ACGGCACGCG TGCCGACCAG GCCCGCGAAG ACGGCGAAGA CCAAGGCCAG
ACCCGCCTGG TCGCCGGTAT CCGCCTGCGT TTCTAA
|
|---|
| Protein sequence | MNDTRKSIMA GVTLLTLLAS ERAMAAGMAH MNHASMEHGT MNHESMGHGQ ATPSQPRTPL
PAITDADRRA AFPPLPGHQV HDRALNWAVV VDKLEYQNFE SSSALNWNAT AWVGGDIDRL
WLRSEGEREQ GKTHKAELQA LWGHAVSPWW ELVAGVRQDF KPASGQAWAA FGIQGTPLYG
LELQTTAYAG ERQQTALRLE AAYAMLLTNR WILEPTLEAN LYGRNDAGRE QGAGLADSEV
GLRLRYEITR GFAPYVGVSF NRLHGTRADQ AREDGEDQGQ TRLVAGIRLR F
|
|---|
| |