| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1819 |
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| Symbol | |
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| ID | 5869599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2041499 |
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| End bp | 2042578 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546936 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001668058 |
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| Protein GI | 167032827 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.523844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGAT CGTTGTGCTT GTTGTCCCTG GTCCTGGCCT TGCCGTTACA GGCGCAAGAA
AAGGTCGTGA ACCTCTATAG CTGGGCCGAC TACGTTGCCC CGCAAACCCT TCAGCGCTTC
GAGCGAGAAA CCGGCTACAA GGTGCGCTAC GACACCTTCG ACACCACTGA AGTGCTGGAA
ACCAAGCTGC TGACCGGTGG TAGCGGTTAC GACGTGGTGG TGCCGTCAGC TACCGTGCTG
GCCAGGGCGC TCAAGGCCAA TGCCCTGCAA CCGCTCGATC CCCAGGCCAT GCCCGGCTAC
AGCAATCTCG ACAAGGACCT GCTGGCCAAG CTCGCCGAGG CCGACCCCGG CAACCGCCAT
GCCGTGCCGT ACACCTGGGG AACGCTGGGC CTTGGGGTGA ATGTGGAGGC CGTGCGTCAG
CGCCTGGGCG ATGTGCCGCT CGACAGCCTC GACCTGCTGT TCAAGCCCGA GTACGCCAGC
CGTCTGAAGG ACTGCGGCAT TGCCATGCCC GATTCGCCAC AGGAAGTGAT CGGGGTTGCC
CTGAACTACC TGGGCAAAGA CCCTTACAGC CAGAACAAGG ATGACCTGGC TGCCGCGCAG
AACCTGCTCA GCCAGTTGCA GCCGTCGATC AGCTATGTCG CCAATGGCCG GCAGATCAGC
GACCTGGCCA ATGGCAGCGT GTGCCTGGCG CTGACCTATA ACGGTGATGC GGCAATGGCC
GCCGACCAGG CCCGCCGTGC CGGCAAGCCG TTCGAGCTGA TCTACCGCAT CCCCCGCGAA
GGCACGCTGG TGTGGCAGGA CAACCTGGTC ATTCCAAAAG ACGCCCCGCA CCCCGAGGCC
GCGCGAGCGT TCATTGCCTT CATGCTCAAG CCCGAGTCGG TGGCGGCGCT GACCAACACG
CTGTTCTTCG CCAATGCCAA CCAAGCCGCC ACACCGCTGG TGGACGAAGC GGTGCGCAAC
GACCCGGACA TCTACCCACC CGCCGAGGTA CGCCAGCGCC TGTTCGCCGA CCGCAGCATG
GCCTTGGCCG ATTTGCGCCA GCGTAACCGC CTTTGGACGG CTTTCCGCAG CCGCCAATGA
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| Protein sequence | MRRSLCLLSL VLALPLQAQE KVVNLYSWAD YVAPQTLQRF ERETGYKVRY DTFDTTEVLE
TKLLTGGSGY DVVVPSATVL ARALKANALQ PLDPQAMPGY SNLDKDLLAK LAEADPGNRH
AVPYTWGTLG LGVNVEAVRQ RLGDVPLDSL DLLFKPEYAS RLKDCGIAMP DSPQEVIGVA
LNYLGKDPYS QNKDDLAAAQ NLLSQLQPSI SYVANGRQIS DLANGSVCLA LTYNGDAAMA
ADQARRAGKP FELIYRIPRE GTLVWQDNLV IPKDAPHPEA ARAFIAFMLK PESVAALTNT
LFFANANQAA TPLVDEAVRN DPDIYPPAEV RQRLFADRSM ALADLRQRNR LWTAFRSRQ
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