Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1784 |
Symbol | |
ID | 5869564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2001926 |
End bp | 2002480 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546901 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001668023 |
Protein GI | 167032792 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGC ACGAAGAGGT TGAAGCCCTC GCGATCCTTA TTCACGACCT GCGCAAATTC AAGAACCTGA CCTTGGGTGA ACTGGCCGAG CGCATCAACC GCTCTGTCGG TTTTCTCTCC CAGGTCGAAC GCGGTGTTTC ACGCCCGACC GTGGCGGACC TCACCGCTAT CAGCGAAGCG CTCGGCGTAT CCACCGCGTA CTTCTACAAC CTGAGCAAGC CCCGCAGCAT CGGCTGGGTC ACGCGCCCCC ATGAGCGGCG CACGCTGTAC CTGGAGTCGG GCATTACCGA CGTGCTGGCC TCGCCGACCA TCGCCGGCGC GTTCGCCATG CTCGACAGCC ATCTCGAGCC CGGCGCCACC AGTGGCGAGG ACTACCTGAG CGATCGTTCC GAGCAGGGCT GCTTCGTGCT CGAAGGCGAG CTCACGGTAT GGCTGGACCA GGGTGACGCC GTGACCCTGC ACGCCAACGA CTGCTTCCAG CTGCAACCCC ACGCGCAATT CCGTTACGCC AACCTGACGG AAAAGACCAC CCGTGTGCTC TGGGTCTTCA ATTGA
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Protein sequence | MKMHEEVEAL AILIHDLRKF KNLTLGELAE RINRSVGFLS QVERGVSRPT VADLTAISEA LGVSTAYFYN LSKPRSIGWV TRPHERRTLY LESGITDVLA SPTIAGAFAM LDSHLEPGAT SGEDYLSDRS EQGCFVLEGE LTVWLDQGDA VTLHANDCFQ LQPHAQFRYA NLTEKTTRVL WVFN
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