Gene PputGB1_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1780 
Symbol 
ID5869560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1997942 
End bp1998658 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content62% 
IMG OID641546897 
Producthypothetical protein 
Protein accessionYP_001668019 
Protein GI167032788 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGC TTGAACCTTT GCGCGGAGCC GTCCGGCTCT CGGTGGCCAG TATTGGCCTG 
TTTTTCTTGA GCGCCTGGCC TGCTGCCTAC GCGCAATCTC TGCCTAGTGC TGCCGAGCTG
CAGCAGTTGG CGCCGAACGC CAACCTGTCC ACCTTGGCCC TGGCCCTTAC TGCCTATTCA
TGCGCCAGTC ACAACGACGC GAACAAGTTG CTGACGGTGA TCGATTACTC CAAGGCCTCG
CGTGACAAAC GCCTGTGGGT GTTCGACCTG CGGGCCCGGA AACTGCTGTT CGAAGAGTGG
GTCGCCCATG GCAAGAACAG CGGCGCCGAT GTGCCGACCA CGTTCTCCAA CGCGCCGAAC
AGTTACCAGT CCTCCATCGG CCTGTATGAA ACCGGCCAGA CCTACAGCGG CAAGCATGGC
CGCTCGCTGC GCCTGCAAGG GTTGGAGCCG GGGTTCAACG ACAACAGCAT GTCGCGGGCA
ATCGTGATGC ATGCCGCCGC GTATGCCGAC CCCAAGGTTG TGCCCGGCCT AGGGCGCCTG
GGGCGCAGCC AGGGCTGCCC TGCCGTTCGG CCGGCCATTG CCGGCAAGCT GATCGAGACG
TTGCAACGCG GTAGCTATGT GTTTGCCTAT TACCCGCAGC AGAACTGGCT GAAAACATCA
CGTTTTCTCA ACGCACAGAG CTGCCCGCTG GCAAATCAGT CGCTCGCCAG CAAGTAG
 
Protein sequence
MSMLEPLRGA VRLSVASIGL FFLSAWPAAY AQSLPSAAEL QQLAPNANLS TLALALTAYS 
CASHNDANKL LTVIDYSKAS RDKRLWVFDL RARKLLFEEW VAHGKNSGAD VPTTFSNAPN
SYQSSIGLYE TGQTYSGKHG RSLRLQGLEP GFNDNSMSRA IVMHAAAYAD PKVVPGLGRL
GRSQGCPAVR PAIAGKLIET LQRGSYVFAY YPQQNWLKTS RFLNAQSCPL ANQSLASK