| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1768 |
|---|
| Symbol | |
|---|
| ID | 5869548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1985449 |
|---|
| End bp | 1986705 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641546885 |
|---|
| Product | allantoate amidohydrolase |
|---|
| Protein accession | YP_001668007 |
|---|
| Protein GI | 167032776 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.67714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.674287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCC AATGGCGTGA GCAGGCCGAA AAGCTGTTCA ACGATGTCGC ATCACTGTCT
CGTGATCCCC ACGAAGGCAT CACTCGTGAA AGCTACGGCC CGGGCGAAAA CGACACCATC
GCTTACCTGA GCGATTTCGC TTTGACGCAT GGTCTTGATG TGGTGCCTGA CCGCGCTGGC
AACGTGATCT TCAAACGCAA GAGCGACAAT GGTGAGCCTG CTTTGTGGTA TGGCTCGCAC
CTTGATTCCG TCCCGCAAGG TGGTAATTAC GATGGGCTGG CCGGCGTTGT GGCGGGTCTG
CTTTGCCTGT GCCGAATGGA CCAGGAAAAA GTAGAGACGG CGCGACCCAT TCGTGTAATC
GGCTTGCGAG GCGAGGAAAG CGCCTGGTAC GGCAAGTCGT ACATCGGATC ACGAGCGCTG
TTTGGTGGGC TGACTGATCA GGACCTTTGC CTTACCAACC GCTTTAGCAA GCGCACGCTT
GCTGAAGCCA TGGAGGCGGT GGGCGCAGAC CTTGAGGCAA TTCGTCGCCA AGAGTGGCTT
ATCGATCGCT CGCAATTTGC CGGCTACCTT GAAATCCACA TTGAGCAAGC CGAGTCGTTG
GAACGTATGG GGCAAGCTCT GGGCATCGTT CCCGGCATTC GCGGAAATTT CCGTCATAAC
CAAGTCCGTT GCCTAGGTGA AGACGGCCAC TCGGGGGCCG TCGCGCGCGA AGACCGCCAC
GACGCCGTAT TTGCCGTGAG TGAGCTCGTT GCTCGAATTG ACGAGCTGTG GAGTGAATAC
GTCGCGGCGG AGCGCGACCT GGTGGTTACC GTTGGTACCT TGGGTACAAA TGCTGCCCAC
CACGCTGTCT CGCGTATCCC AGGCGAAGTC AGCTTCAGCC TCGAAATGCG CAGCCTGCAT
CATGACACGC TCAAGGCGTT TTACTCGGCT GCGCTGGCCG AGGCCAAATC AATCGAGACG
TCTCGCCAGG TTCGATTCGA GTTCGACAAG CGGATCGATA CCGCCCCCGC CGCCATGCAT
GGTCCCTGGA CGGACGTTTT CGTTCGACAA GCCCGTGATA AGGGTTGGAA AGGCGTTCTC
ACGCCTAGTG GTGCTGGCCA CGACGCAGCG GTTTTCGCAA ACGTCGGCAT CCCTAGCGCA
ATGATCTTCA TCCGAAACCA GCATGGGTCC CACAACCCTC ACGAGGCGAT GGGGTTGGAC
GACTTCCTGG CAGCGACAGA GGTGCTGTAT CACTCAACAT TGGAGCTGAA ACCATGA
|
|---|
| Protein sequence | MTAQWREQAE KLFNDVASLS RDPHEGITRE SYGPGENDTI AYLSDFALTH GLDVVPDRAG
NVIFKRKSDN GEPALWYGSH LDSVPQGGNY DGLAGVVAGL LCLCRMDQEK VETARPIRVI
GLRGEESAWY GKSYIGSRAL FGGLTDQDLC LTNRFSKRTL AEAMEAVGAD LEAIRRQEWL
IDRSQFAGYL EIHIEQAESL ERMGQALGIV PGIRGNFRHN QVRCLGEDGH SGAVAREDRH
DAVFAVSELV ARIDELWSEY VAAERDLVVT VGTLGTNAAH HAVSRIPGEV SFSLEMRSLH
HDTLKAFYSA ALAEAKSIET SRQVRFEFDK RIDTAPAAMH GPWTDVFVRQ ARDKGWKGVL
TPSGAGHDAA VFANVGIPSA MIFIRNQHGS HNPHEAMGLD DFLAATEVLY HSTLELKP
|
|---|
| |