| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1733 |
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| Symbol | |
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| ID | 5869513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1952392 |
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| End bp | 1953060 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641546850 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001667972 |
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| Protein GI | 167032741 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000000886349 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATATCG GACAACGCAT TAGAGAAGCA CGCAAAGCAC GGGGCCTTAC GCTTGAGGCG
CTCGCTAACC AGGTCGACAC AGACACTGGC AACCTGTCGC GTCTGGAGCG CGGCAAGCAG
GGAGCTAGTC AGGAACTGTT GACGAAGATT TTCAGCGTCC TGCAACTGGG TGTGGCAGAC
GTAGATCACA TCCGCCCGAA ATCAGCTCAC CCAGGGCTGG CATACGATTG GGATAATTTG
GTCCCTGCCT GCGCAGAGGA CAATCGCGTA AGGAAAGGAT ACCCGTTGAT TAGTTGGGTT
ATTGCCGGTG ACTGGGCAAG GTCTGCAGAC CATCACCATC CAGCAGACGC TGAGTGGCTT
AGTTCTACAG AAAGCGCCGG AGCAAACGGT TTCTGGCTCA GGGTTCGCGG CGACTCGATG
ACCTGCGCGG GAAACCCCAG TTTTCCTGAG GGGTCGCTGA TCCTGGTGAG GCCAGAGGCC
GACATAGTAA GCGGAAAGTA CTATGTTGTG CAGATGCTGG ACAGCGGCGA GATGACCTTC
AAGCAGTACG TCGAAGACGC CGGCATCAAG TACCTGCGCC CCCTCAATCC TGGCTATCGA
ACCATTGAGA TCGACGGAAA CTGCCGGTTC ATCGGCCGAG TGATCGATAC GAAGATGACA
GGCTTATAG
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| Protein sequence | MDIGQRIREA RKARGLTLEA LANQVDTDTG NLSRLERGKQ GASQELLTKI FSVLQLGVAD
VDHIRPKSAH PGLAYDWDNL VPACAEDNRV RKGYPLISWV IAGDWARSAD HHHPADAEWL
SSTESAGANG FWLRVRGDSM TCAGNPSFPE GSLILVRPEA DIVSGKYYVV QMLDSGEMTF
KQYVEDAGIK YLRPLNPGYR TIEIDGNCRF IGRVIDTKMT GL
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