| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1722 |
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| Symbol | |
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| ID | 5869502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1945568 |
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| End bp | 1947310 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546839 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001667961 |
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| Protein GI | 167032730 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.198567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000514519 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACCTCG AACACATCTT CGTCGAGAAC TTCCAGGGCC TGCGCAGCGC CAGCCTGGAC
CTGGCCACGC CGATCACCTT GGTGGCCGGT TTCAACGGTG CCGGTAAGTC GTCGTTGCGT
GAGGCCATTG GCTTCGCCCT GGGTGGGTCC GGCCGTGTCC AGCACAAGAA GGACTACGGC
AAGCTGGTCA CCGAAGGCGA GAAGAAGGCC CAGATCATCG TGAGCCACGA TGGCGCAGCC
AGCAGCTTCG CCCTGCCCAA AGGCACCGCC GAACGCCACA GCGTACCCGG CGACGACTAC
CTGCCATTCG TGCTGACGCC CGGGGCCTTC GCGGCCATGG ACGAGAAAGC CCGTCGCGCC
CTGCTGTTCA AGCTGACCAA GTCCAGCGCC AAGCCTGACG TCGTCGTGAG CATGCTGGCC
AAGCGCAAGG CCAACGCGAC CAAGGTTGAG AAGATCAAGC CGCTGCTGTT GAGCGGCTTC
GGCGCTGCCC AGGAGCAGGC CAAGACCTAC GCCGCTGAGT CGCGCGGCGC CTGGAAGGCC
ATCACCGGCG AGCAGTACGG CAGCGAGAAG GCTGAAGGCT GGGTGTTTGA AGCGCCGGAT
AGCGTTTCCA ATGCTGACGA GCGCGAGGAA GTCTTCAAGA AGCACGCGAA GGCTCAGCAG
GACATCGAAA ACGGCAACCG CTTCATTGGT GAGCAGGACG CCAAACGCCA AGCCGCTCAA
GGGCTGGGCC AGCGCAAGGC GGAATTGCAG GAGGCCGCCG ACCTGTTCGA CCGCGCCGTG
GCCAAGCGCA CCACCACCGA GCAGGACCTG AGCAAGCTGG AACAGCAGCT GCCCGACCTG
CAGGCCCAAC TGAAAGACCA GCAGGCCGGC TCTGGCGGTT GCGAATGCCC AGCCTGCGGC
GTCGGGCTCA AGATCGTTGG CAGCAAGCTG GAGCTGTACC AGGGGCTGAA ACAGGACACT
GCGGCCACCA GCACCCTGGC GCTCGACATC ACCAACATGC AGCGCAGCGT CGAAATGCTG
CGCCGTACCC TGCAGAACGA CATGGCGGCG GTGGCCAAGG CCGAGGCAGC CCGCGAAGAG
CTGAAACAGT TGAAGGGCCA GCAGGCCGAA GCCTTCGACC AGGACCGGTA CGACCGCTCC
ATCGAATCGC TTAACGCCCT GCGCAAACAG GAAGGCGAGC TGTGCGCCCA GTACAACGCA
CTGTGCGAGG CGGCTGACGA GGCCAAGAAC GCTGAGGCCA ATACCCAGAA GGCCGCCGGC
TACCATCTCG ACGTTCTGGA ATGGGTGCTG ATCGAGAAGG CCCTGGCACC TGATGGCATC
CCCGGCGAGA TCCTGGCCGG AGCCCTACAG CCGTTCAATG CCAGCCTTAC CCGAACCTCC
AAGCTCACCG GCTGGCCTGT CGTTCAGGTG TCCACCGAAA TGGACATCAC CGCCGGCGGA
CGCCTGTACC AGCTGCTCAG CGAGTCCGAG CAGTGGCGCT GCGACACGCT GCTGGCCCTG
GCCATCGCTG TGCACTCGGG CTTGAAACTG GTGATGCTCG ATCGCTTCGA TGTTTTGGAC
CTACCGGCGC GCGGGCAACT GCTCGGCATG TTGGTCAGCC TGGCCAAGGC CAACGAAATC
GAAAGCGCCA TCGTACTGGG CACGCTCAAG GCCAAGCCCG CCAAGCTGCC ACCCGAGATC
AGCGCGGTAT GGATCGAAGG CGGTGTCGCC CAGCAAGACC AGCCGATGCA GCAAGCCGGC
TGA
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| Protein sequence | MHLEHIFVEN FQGLRSASLD LATPITLVAG FNGAGKSSLR EAIGFALGGS GRVQHKKDYG
KLVTEGEKKA QIIVSHDGAA SSFALPKGTA ERHSVPGDDY LPFVLTPGAF AAMDEKARRA
LLFKLTKSSA KPDVVVSMLA KRKANATKVE KIKPLLLSGF GAAQEQAKTY AAESRGAWKA
ITGEQYGSEK AEGWVFEAPD SVSNADEREE VFKKHAKAQQ DIENGNRFIG EQDAKRQAAQ
GLGQRKAELQ EAADLFDRAV AKRTTTEQDL SKLEQQLPDL QAQLKDQQAG SGGCECPACG
VGLKIVGSKL ELYQGLKQDT AATSTLALDI TNMQRSVEML RRTLQNDMAA VAKAEAAREE
LKQLKGQQAE AFDQDRYDRS IESLNALRKQ EGELCAQYNA LCEAADEAKN AEANTQKAAG
YHLDVLEWVL IEKALAPDGI PGEILAGALQ PFNASLTRTS KLTGWPVVQV STEMDITAGG
RLYQLLSESE QWRCDTLLAL AIAVHSGLKL VMLDRFDVLD LPARGQLLGM LVSLAKANEI
ESAIVLGTLK AKPAKLPPEI SAVWIEGGVA QQDQPMQQAG
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