Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1718 |
Symbol | |
ID | 5869498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1941585 |
End bp | 1941944 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641546835 |
Product | IS66 Orf2 family protein |
Protein accession | YP_001667957 |
Protein GI | 167032726 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0000218063 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATGCGTC CCGACGCCAA AGTCGAAAAA GTCTATCTCT ACCCCAAGCC CGTCGACTTC CGAAAATCCA TTGATGGCTT GGCGGCGCTG GTCGAGTTGG ACATCAAGGT GGCGGTGTTC GACCCCGTGC TCTTCGTATT TCTCAACAAA TCCCGCAACC GTGTGAAGAT CTTGTACTGG GAGCGCAACG GCTTCTGTCT TTGGCTCAAG CGCCTGGAAT CCGAGCGATT CAAAACATCA CCTGACGCCA CCGACGAAGC GATTGTCCTC ACCGTTCAGG AACTGAACTG GTTACTCGAC GGTTTTGACC TCTGGCGCAA TCGCCCGCAT CAGGTTTTGA CGCCGCGATT CGTCGCCTGA
|
Protein sequence | MMRPDAKVEK VYLYPKPVDF RKSIDGLAAL VELDIKVAVF DPVLFVFLNK SRNRVKILYW ERNGFCLWLK RLESERFKTS PDATDEAIVL TVQELNWLLD GFDLWRNRPH QVLTPRFVA
|
| |