Gene PputGB1_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1709 
Symbol 
ID5869489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1934889 
End bp1935815 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content61% 
IMG OID641546826 
Producttransaldolase B 
Protein accessionYP_001667948 
Protein GI167032717 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.137258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000213936 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCTCCA AGCTGGAACA ACTCAAGCAG TTCACCACCG TGGTCGCCGA CACCGGGGAC 
CTGGACGCCA TCACCCGCCT GAAGCCGGTC GATGCCACCA CCAACCCGTC TTTGCTGCTC
AAGGCCGCTG CCATCCCGGG CTATGCCGAT CTGCTCAAGC AAGTGAAGGC CGACGCCAAG
GGTGATGTCG ACCTGGCCTG CGACAAGTTT GCCGTGGCCG TGGGCTCGGG CATTCTCAAG
GTCATCCCAG GGCGTATCTC CACCGAGGTT GATGCACGCC TGTCGTTCGA TGAGCCGGCC
CTGCTGAACA AGGCACGCCA GTTGATCGCC CTTTACGAAG CGGCCGGTGT GCCAAAAGAC
CGAGTGCTGA TCAAGCTGGC CTCCACCTGG GAAGGCATTC GCGCCGCCGA GAAGCTGGAG
AAGGAAGGCA TCCAGACCAA CCTCACCCTG CTGTTCTCCT TCGCCCAGGC CCAGGCCTGC
GCCGATGCCG GGGTGTTTCT GATTTCGCCG TTCGTGGGCC GTATCTACGA CTGGTACAAA
AAAAGCACCG GCAAGGACTA CGTCGGCGCC GAGGACCCGG GCGTGCAGTC GGTCACGCGT
ATCTACAACT ACTACAAGGC CAATGGCTAC AACACCGTGG TCATGGGCGC CAGCTTCCGT
AATATCGGCC AAATCGAGCA ACTGGCCGGC TGCGACCGCC TGACCATCAG CCCGGAACTG
CTGCAACAGC TTAGCGATGA CCAGGGCGAA CTACCGCAGG TACTGAAGCC AGGCAATGCC
GGTGAAGCCA AGCAGCCGTT GAACGAAAGC CAATTCCGCT GGGCGATGAA TGAAGATGCC
ATGGGCACCG AGAAGCTGGC CGAGGGTATT CGCCAGTTTG CGCGGGACCA GGAGAAGCTG
GAGAAGTTGA TGGCTGAAAA GGCCTGA
 
Protein sequence
MTSKLEQLKQ FTTVVADTGD LDAITRLKPV DATTNPSLLL KAAAIPGYAD LLKQVKADAK 
GDVDLACDKF AVAVGSGILK VIPGRISTEV DARLSFDEPA LLNKARQLIA LYEAAGVPKD
RVLIKLASTW EGIRAAEKLE KEGIQTNLTL LFSFAQAQAC ADAGVFLISP FVGRIYDWYK
KSTGKDYVGA EDPGVQSVTR IYNYYKANGY NTVVMGASFR NIGQIEQLAG CDRLTISPEL
LQQLSDDQGE LPQVLKPGNA GEAKQPLNES QFRWAMNEDA MGTEKLAEGI RQFARDQEKL
EKLMAEKA