| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1704 |
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| Symbol | |
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| ID | 5869484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1929894 |
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| End bp | 1930601 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546821 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_001667943 |
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| Protein GI | 167032712 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00250163 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTAGGA TCGGTGCCAG TGTGATCGAA CGAGTCACCC AGGCCTGTGT CTGCGCCAGC
ATGCTGCTGG CGCCCGTGGC AGCTACCCAG GCCGCCACCG AGGAAGATCC CTGGGAAGCG
GTCAACCGCC CGATCTTTCG CTTCAACGAT ACGGTCGACA CTTATGCCCT CAAGCCATTG
GCCAAGGGCT ACCAGGCTGT CACCCCGCAG TTTCTTGAAG ATGGCATTCA CAACATCTTC
CGCAACCTGG GCGACGTGAC CAACCTGGCC AACAACCTGC TGCAGCTCAA GCCCCACGCG
GCGGGCGTGG ATACTGCGCG GTTGATCGTC AACACCACCT TTGGCCTGGG TGGCTTCTTC
GATGTGGGTA CCAAGATGGG CCTGCAGCGC AGCGACGAAG ACTTCGGCCA GACACTGGGC
TACTGGGGCG TGCCAAGCGG CCCGTACGTG GTCATTCCGC TGCTGGGCCC AAGCACCGTG
CGTGACGGTG TGGCCAAGTA CCCGGACACC TACACCGAAC CCTACCGCTA CATCGACCAC
GTGCCGACGC GCAACTCGAT CTTCGCCCTG GACGTGATCG ACACCCGCGC CAGCCTGCTC
TCGGCCGAGA AGCTGATTCA GGGTGACAAG TACATCTTCA TTCGCAATGC TTACCTGCAG
AACCGCGAGT TCAAGGTCAA GGATGGCGAG GTCGAAGACG ACTTCTAA
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| Protein sequence | MRRIGASVIE RVTQACVCAS MLLAPVAATQ AATEEDPWEA VNRPIFRFND TVDTYALKPL
AKGYQAVTPQ FLEDGIHNIF RNLGDVTNLA NNLLQLKPHA AGVDTARLIV NTTFGLGGFF
DVGTKMGLQR SDEDFGQTLG YWGVPSGPYV VIPLLGPSTV RDGVAKYPDT YTEPYRYIDH
VPTRNSIFAL DVIDTRASLL SAEKLIQGDK YIFIRNAYLQ NREFKVKDGE VEDDF
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