Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1703 |
Symbol | |
ID | 5869483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1929130 |
End bp | 1929693 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641546820 |
Product | hypothetical protein |
Protein accession | YP_001667942 |
Protein GI | 167032711 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00235983 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACGCTG CACCCGCCTT CACTGCTGTG CTGTTCGGCT TGCGCGGCTG CCTGGTGCAG GCCACCAATG GCGCACCCTC GCCCGCCCCC GGCGCTCTGG CCACCCTCGC CAGCCTGCGC CAGCGCCAGG TGCCCTGCAT CTGGCTGGAT GACCTCAACA GCACGCAAAG CAAGCGCCTG GCCCATGTGT TGCCCGCCTG GCTGCCAGGG CATTCGGTCA ACGGCGTGCG CTGGCCGGCG CCAAACGCCT GCTGGCAGGC GCTGATGACC CTGGACAGCG AACGCCTGGA CGGCTGCGTG CTGGTGAGTG GTGACCCGCG CTTGCTGCAG TCAGGCTTGA ACGCGGGGCT ATGGACGGTT GGCCTGGCAG CCTGCAGCCC GTTCTGTGAC CGAGGCTCCG AGCAATGGCA AGGCATGACC CCAAAGGAAC AGGACCAGGC CCGCGGCAAG GCCACGCTGG AGCTGTTCAG CCTGGGCGTG CATTCGGTGA TCGACCACCT GGAAGCGCTG GACACCTGCC TGCAGGACAT CGCCCAGCGC CGGCGCAAGG GTGAAAAACC CTGA
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Protein sequence | MDAAPAFTAV LFGLRGCLVQ ATNGAPSPAP GALATLASLR QRQVPCIWLD DLNSTQSKRL AHVLPAWLPG HSVNGVRWPA PNACWQALMT LDSERLDGCV LVSGDPRLLQ SGLNAGLWTV GLAACSPFCD RGSEQWQGMT PKEQDQARGK ATLELFSLGV HSVIDHLEAL DTCLQDIAQR RRKGEKP
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